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Aliases for LOC100128325 Gene

Subcategory (RNA class) for LOC100128325 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC100128325 Gene

  • Uncharacterized LOC100128325 3
  • AC087071.1 5

External Ids for LOC100128325 Gene

Previous GeneCards Identifiers for LOC100128325 Gene

  • GC07U902368
  • GC07P129568
  • GC07P129784

Summaries for LOC100128325 Gene

GeneCards Summary for LOC100128325 Gene

LOC100128325 (Uncharacterized LOC100128325) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC100128325 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100128325 Gene

Genomics for LOC100128325 Gene

GeneHancer (GH) Regulatory Elements for LOC100128325 Gene

Promoters and enhancers for LOC100128325 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I130140 Promoter/Enhancer 1.8 Ensembl ENCODE dbSUPER 556.5 +1.9 1880 5.4 ELF3 SMAD1 RB1 SIN3A BMI1 ZNF121 EGR1 ZNF143 RUNX3 ZNF263 LOC100128325 TMEM209 KLHDC10 ENSG00000240571
GH07I130141 Enhancer 0.4 ENCODE dbSUPER 550.8 -1.0 -961 0.2 LOC100128325 GC07P130134
GH07I130138 Enhancer 0.3 dbSUPER 556.4 -2.0 -1975 1.6 GLIS1 LOC100128325 KLHDC10 ENSG00000273319 GC07P130134
GH07I130069 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 5.9 -70.6 -70615 3.6 CLOCK IRF4 YY1 E2F8 ZNF143 ZNF548 SP3 NFYC MEF2D GLIS1 KLHDC10 NRF1 CDC26P1 TMEM209 KLF14 LOC100128325 PIR32855
GH07I130209 Enhancer 0.7 ENCODE 10.6 +68.8 68772 1 SMARCA5 HDAC1 AFF1 FOXA2 L3MBTL2 GFI1B FEZF1 MCM2 ZNF148 ATF4 LOC100128325 MEST KLF14 TMEM209 SSMEM1 ENSG00000270992
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100128325 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100128325 Gene

Genomic Locations for LOC100128325 Gene
chr7:130,141,517-130,143,423
(GRCh38/hg38)
Size:
1,907 bases
Orientation:
Plus strand
chr7:129,781,571-129,782,455
(GRCh37/hg19)

Genomic View for LOC100128325 Gene

Genes around LOC100128325 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100128325 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100128325 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100128325 Gene

Proteins for LOC100128325 Gene

Post-translational modifications for LOC100128325 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100128325 Gene

Domains & Families for LOC100128325 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100128325 Gene

Function for LOC100128325 Gene

Phenotypes From GWAS Catalog for LOC100128325 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100128325 Gene

Localization for LOC100128325 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100128325 Gene

Pathways & Interactions for LOC100128325 Gene

SuperPathways for LOC100128325 Gene

No Data Available

Interacting Proteins for LOC100128325 Gene

Gene Ontology (GO) - Biological Process for LOC100128325 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100128325 Gene

Drugs & Compounds for LOC100128325 Gene

No Compound Related Data Available

Transcripts for LOC100128325 Gene

mRNA/cDNA for LOC100128325 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100128325 Gene

No ASD Table

Relevant External Links for LOC100128325 Gene

GeneLoc Exon Structure for
LOC100128325

Expression for LOC100128325 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100128325 Gene

genes like me logo Genes that share expression patterns with LOC100128325: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100128325 Gene

Orthologs for LOC100128325 Gene

Evolution for LOC100128325 Gene

ENSEMBL:
Gene Tree for LOC100128325 (if available)
TreeFam:
Gene Tree for LOC100128325 (if available)

No data available for Orthologs for LOC100128325 Gene

Paralogs for LOC100128325 Gene

No data available for Paralogs for LOC100128325 Gene

Variants for LOC100128325 Gene

Sequence variations from dbSNP and Humsavar for LOC100128325 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000153428 -- 130,142,701(+) G/A non_coding_transcript_variant
rs1001207342 -- 130,143,868(+) C/T downstream_transcript_variant
rs1002143299 -- 130,140,325(+) C/T upstream_transcript_variant
rs1002207208 -- 130,141,039(+) A/G/T upstream_transcript_variant
rs1002259485 -- 130,140,795(+) G/A upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100128325 Gene

Disorders for LOC100128325 Gene

No disorders were found for LOC100128325 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100128325 Gene

Publications for LOC100128325 Gene

No publications were found for LOC100128325 Gene.

Products for LOC100128325 Gene

Sources for LOC100128325 Gene

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