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Aliases for LOC100128310 Gene

Subcategory (RNA class) for LOC100128310 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC100128310 Gene

  • Uncharacterized LOC100128310 3
  • AL162457.1 5

External Ids for LOC100128310 Gene

Previous GeneCards Identifiers for LOC100128310 Gene

  • GC20U900532
  • GC20M060293

Summaries for LOC100128310 Gene

GeneCards Summary for LOC100128310 Gene

LOC100128310 (Uncharacterized LOC100128310) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC100128310 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100128310 Gene

Genomics for LOC100128310 Gene

GeneHancer (GH) Regulatory Elements for LOC100128310 Gene

Promoters and enhancers for LOC100128310 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20I061718 Promoter/Enhancer 1 Ensembl ENCODE 550.8 +0.5 531 2.3 EGR2 LOC100128310 GC20P061698 CDH4
GH20I061724 Enhancer 0.4 ENCODE 0.8 -4.9 -4872 0.2 CTCF RAD21 GC20P061726 LOC100128310 CDH4
GH20I061704 Enhancer 0.2 ENCODE 0.4 +14.0 13964 3.1 GC20P061698 LOC100128310 CDH4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100128310 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100128310 Gene

Genomic Locations for LOC100128310 Gene
chr20:61,717,506-61,719,748
(GRCh38/hg38)
Size:
2,243 bases
Orientation:
Minus strand
chr20:60,292,562-60,294,804
(GRCh37/hg19)

Genomic View for LOC100128310 Gene

Genes around LOC100128310 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100128310 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100128310 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for LOC100128310 Gene

Proteins for LOC100128310 Gene

Post-translational modifications for LOC100128310 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100128310 Gene

Domains & Families for LOC100128310 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100128310 Gene

Function for LOC100128310 Gene

Phenotypes From GWAS Catalog for LOC100128310 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100128310 Gene

Localization for LOC100128310 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100128310 Gene

Pathways & Interactions for LOC100128310 Gene

SuperPathways for LOC100128310 Gene

No Data Available

Interacting Proteins for LOC100128310 Gene

Gene Ontology (GO) - Biological Process for LOC100128310 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100128310 Gene

Drugs & Compounds for LOC100128310 Gene

No Compound Related Data Available

Transcripts for LOC100128310 Gene

mRNA/cDNA for LOC100128310 Gene

(4) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for LOC100128310 Gene

Uncharacterized LOC100128310:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100128310 Gene

No ASD Table

Relevant External Links for LOC100128310 Gene

GeneLoc Exon Structure for
LOC100128310

Expression for LOC100128310 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100128310 Gene

mRNA expression in normal human tissues for LOC100128310 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100128310 Gene

This gene is overexpressed in Whole Blood (x10.5), Spleen (x7.0), and Brain - Nucleus accumbens (basal ganglia) (x4.6).

SOURCE GeneReport for Unigene cluster for LOC100128310 Gene:

Hs.683806
genes like me logo Genes that share expression patterns with LOC100128310: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100128310 Gene

Orthologs for LOC100128310 Gene

Evolution for LOC100128310 Gene

ENSEMBL:
Gene Tree for LOC100128310 (if available)
TreeFam:
Gene Tree for LOC100128310 (if available)

No data available for Orthologs for LOC100128310 Gene

Paralogs for LOC100128310 Gene

No data available for Paralogs for LOC100128310 Gene

Variants for LOC100128310 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100128310 Gene

Disorders for LOC100128310 Gene

Additional Disease Information for LOC100128310

No disorders were found for LOC100128310 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC100128310 Gene

Publications for LOC100128310 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for LOC100128310 Gene

Sources for LOC100128310 Gene

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