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Aliases for LOC100128238 Gene

Aliases for LOC100128238 Gene

  • KIAA0895-Like Pseudogene 3
  • AP005117.1 5

External Ids for LOC100128238 Gene

Previous GeneCards Identifiers for LOC100128238 Gene

  • GC18U900365

Summaries for LOC100128238 Gene

GeneCards Summary for LOC100128238 Gene

LOC100128238 (KIAA0895-Like Pseudogene) is a Pseudogene.

Additional gene information for LOC100128238 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100128238 Gene

Genomics for LOC100128238 Gene

GeneHancer (GH) Regulatory Elements for LOC100128238 Gene

Promoters and enhancers for LOC100128238 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18I010726 Enhancer 0.9 FANTOM5 Ensembl 550.8 +1.9 1915 0.3 ZNF687 NRF1 SIN3A MNT E2F1 CTBP1 MTA1 POLR2A MYC LOC100128238 NAPG MIR6788 PIEZO2
GH18I010749 Enhancer 0.6 ENCODE 7.4 +26.2 26159 3 SOX5 SOX13 FOXA2 SAP130 ZFP64 ZNF133 CEBPB CEBPG ATF4 ZNF24 PIEZO2 ENSG00000264843 LOC100128238 MIR6788
GH18I010688 Enhancer 0.5 ENCODE 5.9 -34.9 -34937 1.8 L3MBTL2 BACH1 MAFG NFE2 MGA LOC100128238 ENSG00000264843 LOC101927410 PIEZO2
GH18I010743 Enhancer 0.3 Ensembl 6.3 +19.3 19283 0.2 IRF2 PIEZO2 LOC100128238 MIR6788
GH18I010708 Enhancer 0.2 FANTOM5 0.4 -16.3 -16265 0.2 ENSG00000264843 LOC100128238 PIEZO2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100128238 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100128238 Gene

Genomic Locations for LOC100128238 Gene
chr18:10,724,618-10,728,539
(GRCh38/hg38)
Size:
3,922 bases
Orientation:
Plus strand
chr18:10,724,616-10,728,537
(GRCh37/hg19)

Genomic View for LOC100128238 Gene

Genes around LOC100128238 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100128238 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100128238 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100128238 Gene

Proteins for LOC100128238 Gene

Post-translational modifications for LOC100128238 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100128238 Gene

Domains & Families for LOC100128238 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100128238 Gene

Function for LOC100128238 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100128238 Gene

Localization for LOC100128238 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100128238 Gene

Pathways & Interactions for LOC100128238 Gene

SuperPathways for LOC100128238 Gene

No Data Available

Interacting Proteins for LOC100128238 Gene

Gene Ontology (GO) - Biological Process for LOC100128238 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100128238 Gene

Drugs & Compounds for LOC100128238 Gene

No Compound Related Data Available

Transcripts for LOC100128238 Gene

mRNA/cDNA for LOC100128238 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100128238 Gene

No ASD Table

Relevant External Links for LOC100128238 Gene

GeneLoc Exon Structure for
LOC100128238

Expression for LOC100128238 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100128238 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100128238 Gene

This gene is overexpressed in Brain - Nucleus accumbens (basal ganglia) (x6.7), Brain - Putamen (basal ganglia) (x4.6), Brain - Caudate (basal ganglia) (x4.3), and Brain - Anterior cingulate cortex (BA24) (x4.1).
genes like me logo Genes that share expression patterns with LOC100128238: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100128238 Gene

Orthologs for LOC100128238 Gene

Evolution for LOC100128238 Gene

ENSEMBL:
Gene Tree for LOC100128238 (if available)
TreeFam:
Gene Tree for LOC100128238 (if available)

No data available for Orthologs for LOC100128238 Gene

Paralogs for LOC100128238 Gene

No data available for Paralogs for LOC100128238 Gene

Variants for LOC100128238 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100128238 Gene

Disorders for LOC100128238 Gene

No disorders were found for LOC100128238 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100128238 Gene

Publications for LOC100128238 Gene

No publications were found for LOC100128238 Gene.

Products for LOC100128238 Gene

Sources for LOC100128238 Gene

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