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Aliases for LOC100128108 Gene

Aliases for LOC100128108 Gene

  • Putative Ubiquitin-Conjugating Enzyme E2Q2-Like Protein 3 3
  • AC027559.1 5

External Ids for LOC100128108 Gene

Previous GeneCards Identifiers for LOC100128108 Gene

  • GC15U900919
  • GC15M100094
  • GC15M102276
  • GC15M078408

Summaries for LOC100128108 Gene

GeneCards Summary for LOC100128108 Gene

LOC100128108 (Putative Ubiquitin-Conjugating Enzyme E2Q2-Like Protein) is a Protein Coding gene.

Additional gene information for LOC100128108 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100128108 Gene

Genomics for LOC100128108 Gene

GeneHancer (GH) Regulatory Elements for LOC100128108 Gene

Promoters and enhancers for LOC100128108 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J101745 Promoter/Enhancer 1.3 Ensembl dbSUPER 659.8 +1.6 1626 2 HDGF RB1 NFRKB ZNF335 POLR2B POLR3A ZNF143 SMARCA5 ZNF202 ZNF362 LOC100128108 PIR52825 PIR33824 SNRPA1 WASH3P LRRK1 GC15P101730 GC15M101723
GH15J101723 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 14.6 +23.7 23703 2.1 PKNOX1 CLOCK SMAD1 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 SLC30A9 TARSL2 LOC100128108 WASH3P SNRPA1 SELENOS TM2D3 GC15M101723
GH15J101640 Enhancer 1.2 Ensembl ENCODE dbSUPER 14.6 +105.8 105834 2.7 ELF3 PKNOX1 ARID4B KLF17 ZNF2 RAD21 ARID2 ZNF143 BCLAF1 THAP11 TM2D3 TARSL2 LOC100128108 SNRPA1 SELENOS RNU6-807P LINC02348
GH15J101674 Enhancer 0.8 Ensembl ENCODE 16 +71.7 71655 2.8 ZNF10 MAX JUNB STAT5A BATF JUND POLR2A EED NFATC1 FOS TM2D3 LOC100128108 RNU6-807P DNM1P47 TARSL2
GH15J101254 Enhancer 1.2 Ensembl ENCODE 10.5 +492.2 492167 2 PKNOX1 ATF1 FOXA2 ARNT ARID4B FEZF1 TCF12 CBX5 GATA2 ARID2 LINS1 CERS3-AS1 SNRPA1 LRRK1 LOC100419174 LOC100128108 ASB7 CHSY1 PIR39927 GC15M101273
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100128108 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the LOC100128108 gene promoter:
  • Pax-5
  • Egr-4
  • MEF-2A
  • aMEF-2
  • NF-1/L
  • NF-1
  • Pax-3
  • Roaz
  • FOXF2
  • HSF2

Genomic Locations for LOC100128108 Gene

Genomic Locations for LOC100128108 Gene
chr15:101,724,664-101,747,827
(GRCh38/hg38)
Size:
23,164 bases
Orientation:
Minus strand
chr15:102,277,297-102,285,913
(GRCh37/hg19)
Size:
8,617 bases
Orientation:
Minus strand

Genomic View for LOC100128108 Gene

Genes around LOC100128108 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100128108 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100128108 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100128108 Gene

Proteins for LOC100128108 Gene

Post-translational modifications for LOC100128108 Gene

No Post-translational modifications

Other Protein References for LOC100128108 Gene

No data available for DME Specific Peptides for LOC100128108 Gene

Domains & Families for LOC100128108 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100128108 Gene

Function for LOC100128108 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100128108 Gene

Localization for LOC100128108 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100128108 Gene

Pathways & Interactions for LOC100128108 Gene

SuperPathways for LOC100128108 Gene

No Data Available

Interacting Proteins for LOC100128108 Gene

Gene Ontology (GO) - Biological Process for LOC100128108 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100128108 Gene

Drugs & Compounds for LOC100128108 Gene

No Compound Related Data Available

Transcripts for LOC100128108 Gene

mRNA/cDNA for LOC100128108 Gene

(5) REFSEQ mRNAs :
(9) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for LOC100128108 Gene

Uncharacterized LOC100128108:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100128108 Gene

No ASD Table

Relevant External Links for LOC100128108 Gene

GeneLoc Exon Structure for
LOC100128108

Expression for LOC100128108 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100128108 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100128108 Gene

This gene is overexpressed in Testis (x5.1).

SOURCE GeneReport for Unigene cluster for LOC100128108 Gene:

Hs.104864
genes like me logo Genes that share expression patterns with LOC100128108: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100128108 Gene

Orthologs for LOC100128108 Gene

Evolution for LOC100128108 Gene

ENSEMBL:
Gene Tree for LOC100128108 (if available)
TreeFam:
Gene Tree for LOC100128108 (if available)

No data available for Orthologs for LOC100128108 Gene

Paralogs for LOC100128108 Gene

(2) SIMAP similar genes for LOC100128108 Gene using alignment to 1 proteins:

  • H0YN89_HUMAN
genes like me logo Genes that share paralogs with LOC100128108: view

No data available for Paralogs for LOC100128108 Gene

Variants for LOC100128108 Gene

Sequence variations from dbSNP and Humsavar for LOC100128108 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000311417 -- 101,744,979(-) CTCTCT/CTCT 5_prime_UTR_variant, genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000651983 -- 101,747,171(-) C/T upstream_transcript_variant
rs1000855388 -- 101,740,027(-) G/C intron_variant
rs1002872990 -- 101,742,710(-) A/G intron_variant
rs1003031199 -- 101,736,487(-) G/A downstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100128108 Gene

Disorders for LOC100128108 Gene

Additional Disease Information for LOC100128108

No disorders were found for LOC100128108 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC100128108 Gene

Publications for LOC100128108 Gene

  1. Creation of genome-wide protein expression libraries using random activation of gene expression. (PMID: 11329013) Harrington JJ … Ducar M (Nature biotechnology 2001) 3 58

Products for LOC100128108 Gene

Sources for LOC100128108 Gene

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