Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC100128093 Gene

Aliases for LOC100128093 Gene

  • Magnesium Transporter 1 Pseudogene 3
  • AL138787.1 5

External Ids for LOC100128093 Gene

Previous GeneCards Identifiers for LOC100128093 Gene

  • GC01U901937
  • GC01M036319
  • GC01M036547
  • GC01M036548

Summaries for LOC100128093 Gene

GeneCards Summary for LOC100128093 Gene

LOC100128093 (Magnesium Transporter 1 Pseudogene) is a Pseudogene.

Additional gene information for LOC100128093 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100128093 Gene

Genomics for LOC100128093 Gene

GeneHancer (GH) Regulatory Elements for LOC100128093 Gene

Promoters and enhancers for LOC100128093 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I036083 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE 550.8 -0.1 -91 1.2 MXI1 KLF1 SIN3A EBF1 BMI1 ZIC2 GLIS2 POLR2A PATZ1 VEZF1 TEKT2 LOC100128093 LOC105378647 AGO3 MAP7D1 ADPRHL2
GH01I036299 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 10.3 -219.8 -219757 8.8 HDGF PKNOX1 SMAD1 MLX ARNT ARID4B NEUROD1 SIN3A DMAP1 ZNF2 SH3D21 STK40 SNORA63C OSCP1 MAP7D1 TRAPPC3 LSM10 RNU4-27P TEKT2 LOC100128093
GH01I036222 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 10.7 -140.4 -140366 4.7 CLOCK MLX FEZF1 DMAP1 YY1 ZNF213 E2F8 ZNF143 ZNF263 SP3 THRAP3 TRAPPC3 MAP7D1 COL8A2 ADPRHL2 LOC100128093 TEKT2 LSM10 RNU4-27P SNORA63C
GH01I035882 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 10.9 +198.4 198355 6.2 HDGF SMAD1 ARNT ARID4B SIN3A FEZF1 ZNF2 ZNF207 ZNF143 KLF13 AGO1 AGO3 ZMYM4 LOC100128093 TEKT2 ADPRHL2 C1orf216 ENSG00000271164 GC01P035916 PIR56740
GH01I036169 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 10.8 -90.6 -90621 10.1 BCOR CTCF USF1 JUN BACH1 SIN3A ZMYM3 BMI1 RAD21 ZNF664 MAP7D1 ENSG00000116883 COL8A2 ADPRHL2 LOC100128093 TEKT2 SH3D21 EVA1B RNU4-27P LSM10
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100128093 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the LOC100128093 gene promoter:

Genomic Locations for LOC100128093 Gene

Genomic Locations for LOC100128093 Gene
chr1:36,080,066-36,084,026
(GRCh38/hg38)
Size:
3,961 bases
Orientation:
Minus strand
chr1:36,545,667-36,547,923
(GRCh37/hg19)

Genomic View for LOC100128093 Gene

Genes around LOC100128093 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100128093 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100128093 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100128093 Gene

Proteins for LOC100128093 Gene

Post-translational modifications for LOC100128093 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100128093 Gene

Domains & Families for LOC100128093 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100128093 Gene

Function for LOC100128093 Gene

Phenotypes From GWAS Catalog for LOC100128093 Gene

Phenotypes for LOC100128093 Gene

GenomeRNAi human phenotypes for LOC100128093:
genes like me logo Genes that share phenotypes with LOC100128093: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100128093 Gene

Localization for LOC100128093 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100128093 Gene

Pathways & Interactions for LOC100128093 Gene

SuperPathways for LOC100128093 Gene

No Data Available

Interacting Proteins for LOC100128093 Gene

Gene Ontology (GO) - Biological Process for LOC100128093 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100128093 Gene

Drugs & Compounds for LOC100128093 Gene

No Compound Related Data Available

Transcripts for LOC100128093 Gene

mRNA/cDNA for LOC100128093 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100128093 Gene

No ASD Table

Relevant External Links for LOC100128093 Gene

GeneLoc Exon Structure for
LOC100128093

Expression for LOC100128093 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100128093 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100128093 Gene

This gene is overexpressed in Testis (x33.2).
genes like me logo Genes that share expression patterns with LOC100128093: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100128093 Gene

Orthologs for LOC100128093 Gene

Evolution for LOC100128093 Gene

ENSEMBL:
Gene Tree for LOC100128093 (if available)
TreeFam:
Gene Tree for LOC100128093 (if available)

No data available for Orthologs for LOC100128093 Gene

Paralogs for LOC100128093 Gene

No data available for Paralogs for LOC100128093 Gene

Variants for LOC100128093 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100128093 Gene

Disorders for LOC100128093 Gene

No disorders were found for LOC100128093 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100128093 Gene

Publications for LOC100128093 Gene

No publications were found for LOC100128093 Gene.

Products for LOC100128093 Gene

Sources for LOC100128093 Gene

Content
Loading form....