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Aliases for LOC100128091 Gene

Aliases for LOC100128091 Gene

  • Coiled-Coil Domain Containing 25 Pseudogene 3
  • AL035404.1 5

External Ids for LOC100128091 Gene

Previous GeneCards Identifiers for LOC100128091 Gene

  • GC01U901684
  • GC01P039957
  • GC01P040184

Summaries for LOC100128091 Gene

GeneCards Summary for LOC100128091 Gene

LOC100128091 (Coiled-Coil Domain Containing 25 Pseudogene) is a Pseudogene.

Additional gene information for LOC100128091 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100128091 Gene

Genomics for LOC100128091 Gene

GeneHancer (GH) Regulatory Elements for LOC100128091 Gene

Promoters and enhancers for LOC100128091 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J039720 Enhancer 0.7 ENCODE 0.7 +2.2 2176 0.2 CTCF MXI1 ZNF384 RAD21 CC2D1A ZNF664 POLR2A ZNF143 SMC3 ZNF362 GC01M039724 LOC100128091 PPIE
GH01J039700 Enhancer 1.1 Ensembl ENCODE 0.4 -16.6 -16646 1.9 HDAC1 HNRNPUL1 SMAD1 RB1 NFIB ZSCAN4 SIN3A RAD21 ZNF335 ZNF766 PPIE MYCBP RLF RRAGC NFYC BMP8B LOC100128091
GH01J039694 Enhancer 0.4 ENCODE 0.3 -23.8 -23764 0.1 PKNOX1 USF2 FOS PPIE LOC100128091
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100128091 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100128091 Gene

Genomic Locations for LOC100128091 Gene
chr1:39,718,028-39,718,595
(GRCh38/hg38)
Size:
568 bases
Orientation:
Plus strand
chr1:40,183,700-40,184,267
(GRCh37/hg19)
Size:
568 bases
Orientation:
Plus strand

Genomic View for LOC100128091 Gene

Genes around LOC100128091 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100128091 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100128091 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100128091 Gene

Proteins for LOC100128091 Gene

Post-translational modifications for LOC100128091 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100128091 Gene

Domains & Families for LOC100128091 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100128091 Gene

Function for LOC100128091 Gene

Phenotypes From GWAS Catalog for LOC100128091 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100128091 Gene

Localization for LOC100128091 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100128091 Gene

Pathways & Interactions for LOC100128091 Gene

SuperPathways for LOC100128091 Gene

No Data Available

Interacting Proteins for LOC100128091 Gene

Gene Ontology (GO) - Biological Process for LOC100128091 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100128091 Gene

Drugs & Compounds for LOC100128091 Gene

No Compound Related Data Available

Transcripts for LOC100128091 Gene

mRNA/cDNA for LOC100128091 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100128091 Gene

No ASD Table

Relevant External Links for LOC100128091 Gene

GeneLoc Exon Structure for
LOC100128091

Expression for LOC100128091 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100128091 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100128091 Gene

This gene is overexpressed in Testis (x8.0), Ovary (x7.9), and Brain - Nucleus accumbens (basal ganglia) (x5.4).
genes like me logo Genes that share expression patterns with LOC100128091: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100128091 Gene

Orthologs for LOC100128091 Gene

Evolution for LOC100128091 Gene

ENSEMBL:
Gene Tree for LOC100128091 (if available)
TreeFam:
Gene Tree for LOC100128091 (if available)

No data available for Orthologs for LOC100128091 Gene

Paralogs for LOC100128091 Gene

No data available for Paralogs for LOC100128091 Gene

Variants for LOC100128091 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100128091 Gene

Disorders for LOC100128091 Gene

No disorders were found for LOC100128091 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100128091 Gene

Publications for LOC100128091 Gene

No publications were found for LOC100128091 Gene.

Products for LOC100128091 Gene

Sources for LOC100128091 Gene

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