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Aliases for LOC100128048 Gene

Aliases for LOC100128048 Gene

  • Cysteine And Histidine Rich Domain Containing 1 Pseudogene 3
  • AC098824.1 5

External Ids for LOC100128048 Gene

Previous GeneCards Identifiers for LOC100128048 Gene

  • GC02U901377
  • GC02M042907
  • GC02M043051

Summaries for LOC100128048 Gene

GeneCards Summary for LOC100128048 Gene

LOC100128048 (Cysteine And Histidine Rich Domain Containing 1 Pseudogene) is a Pseudogene.

Additional gene information for LOC100128048 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100128048 Gene

Genomics for LOC100128048 Gene

GeneHancer (GH) Regulatory Elements for LOC100128048 Gene

Promoters and enhancers for LOC100128048 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I042827 Promoter/Enhancer 1.4 Ensembl ENCODE 550.8 -0.2 -175 1 ELF3 PKNOX1 RB1 ARID4B ZNF76 SIN3A ZNF48 ZSCAN9 RAD21 SLC30A9 LOC100128048 LOC105374567 GC02P042853 GC02P042660
GH02I042828 Enhancer 1.2 Ensembl ENCODE dbSUPER 550.8 -1.5 -1534 1.5 RB1 ARID4B ZNF2 ZNF48 RAD21 ARID2 ZNF143 RCOR1 BCLAF1 CREM LOC100128048 HAAO LOC105374567 GC02P042853 GC02P042660
GH02I042835 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -8.4 -8424 1.7 BCOR ELF3 JUN MAX CEBPG ZNF644 TEAD3 ZNF316 POLR2A FOSL2 LOC100128048 GC02P042853 LOC105374567 GC02P042660
GH02I042843 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -17.5 -17538 4.2 STAT1 PKNOX1 BCL6B FOS TRIM28 RNU6-958P OXER1 GC02P042853 LOC100128048 LOC105374567 GC02P042660
GH02I042813 Enhancer 0.6 ENCODE 0.4 +14.4 14399 0.1 CTCF TEAD1 ZNF511 ARID4B RAD21 CREB1 IKZF2 SPI1 LOC105374567 TRI-TAT2-1 LOC100128048 GC02P042660
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100128048 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100128048 Gene

Genomic Locations for LOC100128048 Gene
chr2:42,824,728-42,827,705
(GRCh38/hg38)
Size:
2,978 bases
Orientation:
Minus strand
chr2:43,051,868-43,054,845
(GRCh37/hg19)

Genomic View for LOC100128048 Gene

Genes around LOC100128048 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100128048 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100128048 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100128048 Gene

Proteins for LOC100128048 Gene

Post-translational modifications for LOC100128048 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100128048 Gene

Domains & Families for LOC100128048 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100128048 Gene

Function for LOC100128048 Gene

Phenotypes From GWAS Catalog for LOC100128048 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100128048 Gene

Localization for LOC100128048 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100128048 Gene

Pathways & Interactions for LOC100128048 Gene

SuperPathways for LOC100128048 Gene

No Data Available

Interacting Proteins for LOC100128048 Gene

Gene Ontology (GO) - Biological Process for LOC100128048 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100128048 Gene

Drugs & Compounds for LOC100128048 Gene

No Compound Related Data Available

Transcripts for LOC100128048 Gene

mRNA/cDNA for LOC100128048 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100128048 Gene

No ASD Table

Relevant External Links for LOC100128048 Gene

GeneLoc Exon Structure for
LOC100128048

Expression for LOC100128048 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100128048 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100128048 Gene

This gene is overexpressed in Testis (x4.5).
genes like me logo Genes that share expression patterns with LOC100128048: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100128048 Gene

Orthologs for LOC100128048 Gene

Evolution for LOC100128048 Gene

ENSEMBL:
Gene Tree for LOC100128048 (if available)
TreeFam:
Gene Tree for LOC100128048 (if available)

No data available for Orthologs for LOC100128048 Gene

Paralogs for LOC100128048 Gene

No data available for Paralogs for LOC100128048 Gene

Variants for LOC100128048 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100128048 Gene

Disorders for LOC100128048 Gene

No disorders were found for LOC100128048 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100128048 Gene

Publications for LOC100128048 Gene

No publications were found for LOC100128048 Gene.

Products for LOC100128048 Gene

Sources for LOC100128048 Gene

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