Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC100128027 Gene

Aliases for LOC100128027 Gene

  • Cysteine Rich DPF Motif Domain Containing 1 Pseudogene 3
  • AC012358.2 5

External Ids for LOC100128027 Gene

Previous GeneCards Identifiers for LOC100128027 Gene

  • GC02U901248
  • GC02P055305
  • GC02P055452

Summaries for LOC100128027 Gene

GeneCards Summary for LOC100128027 Gene

LOC100128027 (Cysteine Rich DPF Motif Domain Containing 1 Pseudogene) is a Pseudogene.

Additional gene information for LOC100128027 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100128027 Gene

Genomics for LOC100128027 Gene

GeneHancer (GH) Regulatory Elements for LOC100128027 Gene

Promoters and enhancers for LOC100128027 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I055222 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE dbSUPER 550.8 -0.2 -239 3 HDGF SIN3A ZNF2 YY1 ZNF121 POLR2B GLIS2 ZNF207 ZNF143 ZNF592 LOC100128027 CLHC1 EML6 RTN4 CCDC88A ENSG00000203327
GH02I055225 Enhancer 0.5 Ensembl ENCODE 550.8 +1.4 1438 0.2 USF1 LOC100128027 CLHC1 PRORSD1P RPS27A
GH02I055518 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 11.1 +295.6 295554 2.5 HDGF PKNOX1 SMAD1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B CFAP36 CLHC1 LOC100128027 PNPT1 ENSG00000212175
GH02I055018 Enhancer 1 Ensembl ENCODE dbSUPER 9.9 -204.7 -204720 1.7 JUN CEBPB DACH1 CEBPG ZNF169 PRDM10 FOSL2 SPI1 ZBTB20 RTN4 LOC100128027 CLHC1 RNU6-433P GC02P055039
GH02I055875 Enhancer 0.6 ENCODE dbSUPER 5 +651.7 651708 1.5 JUND POLR2A CREB1 LOC100128027 CCDC88A PRORSD1P EFEMP1 GC02P055762
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100128027 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100128027 Gene

Genomic Locations for LOC100128027 Gene
chr2:55,224,280-55,225,908
(GRCh38/hg38)
Size:
1,629 bases
Orientation:
Plus strand
chr2:55,451,416-55,453,044
(GRCh37/hg19)

Genomic View for LOC100128027 Gene

Genes around LOC100128027 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100128027 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100128027 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100128027 Gene

Proteins for LOC100128027 Gene

Post-translational modifications for LOC100128027 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100128027 Gene

Domains & Families for LOC100128027 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100128027 Gene

Function for LOC100128027 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100128027 Gene

Localization for LOC100128027 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100128027 Gene

Pathways & Interactions for LOC100128027 Gene

SuperPathways for LOC100128027 Gene

No Data Available

Interacting Proteins for LOC100128027 Gene

Gene Ontology (GO) - Biological Process for LOC100128027 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100128027 Gene

Drugs & Compounds for LOC100128027 Gene

No Compound Related Data Available

Transcripts for LOC100128027 Gene

mRNA/cDNA for LOC100128027 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100128027 Gene

No ASD Table

Relevant External Links for LOC100128027 Gene

GeneLoc Exon Structure for
LOC100128027

Expression for LOC100128027 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100128027 Gene

genes like me logo Genes that share expression patterns with LOC100128027: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100128027 Gene

Orthologs for LOC100128027 Gene

Evolution for LOC100128027 Gene

ENSEMBL:
Gene Tree for LOC100128027 (if available)
TreeFam:
Gene Tree for LOC100128027 (if available)

No data available for Orthologs for LOC100128027 Gene

Paralogs for LOC100128027 Gene

No data available for Paralogs for LOC100128027 Gene

Variants for LOC100128027 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100128027 Gene

Disorders for LOC100128027 Gene

No disorders were found for LOC100128027 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100128027 Gene

Publications for LOC100128027 Gene

No publications were found for LOC100128027 Gene.

Products for LOC100128027 Gene

Sources for LOC100128027 Gene

Content
Loading form....