Aliases for LOC100127955 Gene

Subcategory (RNA class) for LOC100127955 Gene

ncRNA

Aliases for LOC100127955 Gene

  • Uncharacterized LOC100127955 3

External Ids for LOC100127955 Gene

Previous GeneCards Identifiers for LOC100127955 Gene

  • GC07P001852
  • GC07U902793

Summaries for LOC100127955 Gene

GeneCards Summary for LOC100127955 Gene

LOC100127955 (Uncharacterized LOC100127955) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC100127955 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100127955 Gene

Genomics for LOC100127955 Gene

GeneHancer (GH) Regulatory Elements for LOC100127955 Gene

Promoters and enhancers for LOC100127955 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J001838 Enhancer 0.4 ENCODE 500.7 +0.7 739 0.3 POLR2G SPI1 POLR2A ZBTB33 ENSG00000176349 LOC100127955 HSALNG0134398-002 lnc-MAD1L1-6 ENSG00000286192 MAD1L1
GH07J001841 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas 0.4 +5.8 5753 3.7 REST ZBTB26 CTCF TFDP1 SRSF1 RAD21 SAP130 POLR2G POLR2A SPI1 MIR4655 lnc-PSMG3-3 ENSG00000176349 NUDT1 MRM2 TMEM184A IQCE LOC100127955 lnc-MAD1L1-6 MAD1L1
GH07J001849 Enhancer 0.6 Ensembl 0.4 +11.3 11319 0.8 EP300 TARDBP POLR2G PAX8 NFATC1 PBX3 AGO1 BCL3 NFIC POLR2A MRM2 MIR4655 LOC100127955 ENSG00000176349 piR-35002-065 lnc-MAD1L1-6 MAD1L1 ENSG00000286192
GH07J001850 Enhancer 0.3 Ensembl 0.4 +12.3 12319 0.4 AGO1 RBM22 ENSG00000176349 TMEM184A MIR4655 LOC100127955 piR-35002-065 lnc-MAD1L1-6 MAD1L1 ENSG00000286192
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100127955 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100127955 Gene

Genomic Locations for LOC100127955 Gene
chr7:1,837,682-1,849,931
(GRCh38/hg38)
Size:
12,250 bases
Orientation:
Plus strand

Genomic View for LOC100127955 Gene

Genes around LOC100127955 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100127955 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100127955 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100127955 Gene

Proteins for LOC100127955 Gene

Post-translational modifications for LOC100127955 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100127955 Gene

Domains & Families for LOC100127955 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100127955 Gene

Function for LOC100127955 Gene

Phenotypes From GWAS Catalog for LOC100127955 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100127955 Gene

Localization for LOC100127955 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100127955 Gene

Pathways & Interactions for LOC100127955 Gene

PathCards logo

SuperPathways for LOC100127955 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC100127955 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100127955 Gene

Drugs & Compounds for LOC100127955 Gene

No Compound Related Data Available

Transcripts for LOC100127955 Gene

mRNA/cDNA for LOC100127955 Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100127955 Gene

No ASD Table

Relevant External Links for LOC100127955 Gene

GeneLoc Exon Structure for
LOC100127955

Expression for LOC100127955 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC100127955

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100127955 Gene

Orthologs for LOC100127955 Gene

No data available for Orthologs and Evolution for LOC100127955 Gene

Paralogs for LOC100127955 Gene

No data available for Paralogs for LOC100127955 Gene

Variants for LOC100127955 Gene

Additional dbSNP identifiers (rs#s) for LOC100127955 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100127955 Gene

Disorders for LOC100127955 Gene

No disorders were found for LOC100127955 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100127955 Gene

Publications for LOC100127955 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 54

No data available for Mastermind for LOC100127955 Gene

Products for LOC100127955 Gene

Sources for LOC100127955 Gene