Aliases for LOC100127938 Gene

Aliases for LOC100127938 Gene

  • KIAA1191 Pseudogene 3

External Ids for LOC100127938 Gene

Previous GeneCards Identifiers for LOC100127938 Gene

  • GC11U901151
  • GC11P100969
  • GC11P101464
  • GC11P097398
  • GC11P101584

Summaries for LOC100127938 Gene

GeneCards Summary for LOC100127938 Gene

LOC100127938 (KIAA1191 Pseudogene) is a Pseudogene.

Additional gene information for LOC100127938 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100127938 Gene

Genomics for LOC100127938 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100127938 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J101610 Enhancer 0.3 Ensembl 0.4 +16.1 16124 0.4 POLR2A TRPC6 lnc-CEP126-1 LOC100127938 lnc-TRPC6-1 PGR
GH11J101587 Enhancer 0.2 Ensembl 0.4 -7.0 -6976 0.2 ENSG00000254506 lnc-CEP126-2 LOC100127938 TRPC6 lnc-TRPC6-1 PGR
GH11J101612 Enhancer 0.2 Ensembl 0.4 +18.5 18524 0.4 lnc-CEP126-1 TRPC6 LOC100127938 lnc-TRPC6-1 PGR
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100127938 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100127938 Gene

Genomic Locations for LOC100127938 Gene
chr11:101,594,077-101,594,931
(GRCh38/hg38)
Size:
855 bases
Orientation:
Plus strand
chr11:101,455,026-101,465,887
(GRCh37/hg19)
Size:
10,862 bases
Orientation:
Plus strand

Genomic View for LOC100127938 Gene

Genes around LOC100127938 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100127938 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100127938 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100127938 Gene

Proteins for LOC100127938 Gene

Post-translational modifications for LOC100127938 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100127938 Gene

Domains & Families for LOC100127938 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100127938 Gene

Function for LOC100127938 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100127938 Gene

Localization for LOC100127938 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100127938 Gene

Pathways & Interactions for LOC100127938 Gene

PathCards logo

SuperPathways for LOC100127938 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100127938 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100127938 Gene

Drugs & Compounds for LOC100127938 Gene

No Compound Related Data Available

Transcripts for LOC100127938 Gene

mRNA/cDNA for LOC100127938 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100127938 Gene

No ASD Table

Relevant External Links for LOC100127938 Gene

GeneLoc Exon Structure for
LOC100127938

Expression for LOC100127938 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100127938 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100127938 Gene

This gene is overexpressed in Ovary (x4.8) and Cervix - Endocervix (x4.5).
genes like me logo Genes that share expression patterns with LOC100127938: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100127938 Gene

Orthologs for LOC100127938 Gene

No data available for Orthologs and Evolution for LOC100127938 Gene

Paralogs for LOC100127938 Gene

No data available for Paralogs for LOC100127938 Gene

Variants for LOC100127938 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100127938 Gene

Disorders for LOC100127938 Gene

No disorders were found for LOC100127938 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100127938 Gene

Publications for LOC100127938 Gene

No publications were found for LOC100127938 Gene.

No data available for Mastermind for LOC100127938 Gene

Products for LOC100127938 Gene

Sources for LOC100127938 Gene