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Aliases for LOC100127892 Gene

Subcategory (RNA class) for LOC100127892 Gene

antisense

Aliases for LOC100127892 Gene

  • ATP Synthase Peripheral Stalk-Membrane Subunit B Pseudogene 3
  • AC128687.1 5

External Ids for LOC100127892 Gene

ORGUL Members for LOC100127892 Gene

Previous GeneCards Identifiers for LOC100127892 Gene

  • GC03U901109
  • GC03P115180
  • GC03P113693

Summaries for LOC100127892 Gene

GeneCards Summary for LOC100127892 Gene

LOC100127892 (ATP Synthase Peripheral Stalk-Membrane Subunit B Pseudogene) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for LOC100127892 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100127892 Gene

Genomics for LOC100127892 Gene

GeneHancer (GH) Regulatory Elements for LOC100127892 Gene

Promoters and enhancers for LOC100127892 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I113985 Enhancer 0.4 FANTOM5 550.8 +1.7 1700 0.3 EBF1 LOC100127892 CCDC191 QTRT2 ZDHHC23 SIDT1 USF3 LOC105374048 GC03M113853
GH03I113982 Enhancer 0.2 FANTOM5 550.8 -1.1 -1064 0.1 LOC100127892 CCDC191 QTRT2 ZDHHC23 DRD3 GC03M113853
GH03I113947 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 0.3 -36.0 -36041 2 ARID4B ZNF76 SIN3A DMAP1 BMI1 ZNF335 GLIS2 EGR1 SCRT2 RUNX3 ENSG00000273394 ZDHHC23 LOC100127892 GRAMD1C GC03M113853
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100127892 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100127892 Gene

Genomic Locations for LOC100127892 Gene
chr3:113,984,021-113,984,655
(GRCh38/hg38)
Size:
635 bases
Orientation:
Plus strand
chr3:113,702,868-113,703,502
(GRCh37/hg19)

Genomic View for LOC100127892 Gene

Genes around LOC100127892 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100127892 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100127892 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100127892 Gene

Proteins for LOC100127892 Gene

Post-translational modifications for LOC100127892 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100127892 Gene

Domains & Families for LOC100127892 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100127892 Gene

Function for LOC100127892 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100127892 Gene

Localization for LOC100127892 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100127892 Gene

Pathways & Interactions for LOC100127892 Gene

SuperPathways for LOC100127892 Gene

No Data Available

Interacting Proteins for LOC100127892 Gene

Gene Ontology (GO) - Biological Process for LOC100127892 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100127892 Gene

Drugs & Compounds for LOC100127892 Gene

No Compound Related Data Available

Transcripts for LOC100127892 Gene

mRNA/cDNA for LOC100127892 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100127892 Gene

No ASD Table

Relevant External Links for LOC100127892 Gene

GeneLoc Exon Structure for
LOC100127892

Expression for LOC100127892 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100127892 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100127892 Gene

This gene is overexpressed in Brain - Nucleus accumbens (basal ganglia) (x4.1).
genes like me logo Genes that share expression patterns with LOC100127892: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100127892 Gene

Orthologs for LOC100127892 Gene

Evolution for LOC100127892 Gene

ENSEMBL:
Gene Tree for LOC100127892 (if available)
TreeFam:
Gene Tree for LOC100127892 (if available)

No data available for Orthologs for LOC100127892 Gene

Paralogs for LOC100127892 Gene

No data available for Paralogs for LOC100127892 Gene

Variants for LOC100127892 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100127892 Gene

Disorders for LOC100127892 Gene

No disorders were found for LOC100127892 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100127892 Gene

Publications for LOC100127892 Gene

No publications were found for LOC100127892 Gene.

Products for LOC100127892 Gene

Sources for LOC100127892 Gene

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