Aliases for LOC100126584 Gene

Subcategory (RNA class) for LOC100126584 Gene

lncRNA

Aliases for LOC100126584 Gene

  • Uncharacterized LOC100126584 3

External Ids for LOC100126584 Gene

Previous GeneCards Identifiers for LOC100126584 Gene

  • GC00U922371
  • GC06U902494

Summaries for LOC100126584 Gene

GeneCards Summary for LOC100126584 Gene

LOC100126584 (Uncharacterized LOC100126584) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC100126584 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC100126584 Gene

Genomics for LOC100126584 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC100126584 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J125196 Enhancer 0.8 ENCODE 600.7 +0.1 101 2.9 ZNF221 PRDM10 IKZF1 FOXA1 PKNOX1 ZNF24 ZNF600 ZBTB20 SP1 ZNF766 LOC100126584 TRMT11 HDDC2 TPD52L1 lnc-RNF217-2
GH06J125200 Enhancer 1 ENCODE 0.7 -4.1 -4136 2.8 CEBPG CREB1 PRDM10 ZNF629 LEF1 IKZF1 ZNF692 TARDBP JUND PRDM1 HDDC2 TPD52L1 LOC100126584 piR-31937-220
GH06J125153 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.3 +43.5 43524 2.6 CREB1 GATAD2A CTCF HNRNPL TEAD4 PRDM10 REST ZNF629 IKZF1 KDM1A TPD52L1 HDDC2 lnc-RNF217-2 LOC100126584
GH06J125191 Promoter/Enhancer 1.2 Ensembl ENCODE 0.4 +5.1 5092 2.6 CREB1 CTCF RFX1 KDM1A JUND FOXA1 ZNF143 REST RAD21 TRIM22 HDDC2 LOC100126584 lnc-RNF217-2 TPD52L1
GH06J125187 Enhancer 0.8 Ensembl ENCODE 0.4 +9.2 9193 1.7 JUND HDAC1 FOXJ2 GTF2E2 ZNF766 HMBOX1 ZNF10 ZBTB11 CREB1 FOSL1 HDDC2 LOC100126584 lnc-RNF217-2 TPD52L1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC100126584 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC100126584 Gene

Genomic Locations for LOC100126584 Gene
chr6:125,182,943-125,197,817
(GRCh38/hg38)
Size:
14,875 bases
Orientation:
Minus strand

Genomic View for LOC100126584 Gene

Genes around LOC100126584 on UCSC Golden Path with GeneCards custom track
LOC100126584 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC100126584 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100126584 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100126584 Gene

Proteins for LOC100126584 Gene

Post-translational modifications for LOC100126584 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100126584 Gene

Domains & Families for LOC100126584 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC100126584 Gene

Function for LOC100126584 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100126584 Gene

Localization for LOC100126584 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100126584 Gene

Pathways & Interactions for LOC100126584 Gene

PathCards logo

SuperPathways for LOC100126584 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC100126584 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC100126584 Gene

Drugs & Compounds for LOC100126584 Gene

No Compound Related Data Available

Transcripts for LOC100126584 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC100126584 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000BC4658_9606 lncRNA 723 1

RefSeq: NR_149043,

LOC100126584 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC100126584 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100126584 Gene

No ASD Table

Relevant External Links for LOC100126584 Gene

GeneLoc Exon Structure for
LOC100126584

Expression for LOC100126584 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC100126584 Gene

mRNA expression in normal human tissues for LOC100126584 Gene

SOURCE GeneReport for Unigene cluster for LOC100126584 Gene:

Hs.640031
genes like me logo Genes that share expression patterns with LOC100126584: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100126584 Gene

Orthologs for LOC100126584 Gene

No data available for Orthologs and Evolution for LOC100126584 Gene

Paralogs for LOC100126584 Gene

No data available for Paralogs for LOC100126584 Gene

Variants for LOC100126584 Gene

Additional dbSNP identifiers (rs#s) for LOC100126584 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100126584 Gene

Disorders for LOC100126584 Gene

No disorders were found for LOC100126584 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100126584 Gene

Publications for LOC100126584 Gene

No publications were found for LOC100126584 Gene.

No data available for Mastermind for LOC100126584 Gene

Products for LOC100126584 Gene

Sources for LOC100126584 Gene