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Aliases for LOC100125409 Gene

Aliases for LOC100125409 Gene

  • Histone PARylation Factor 1 Pseudogene 3

External Ids for LOC100125409 Gene

Previous GeneCards Identifiers for LOC100125409 Gene

  • GC12U900760
  • GC12P068793
  • GC12P070507

Summaries for LOC100125409 Gene

GeneCards Summary for LOC100125409 Gene

LOC100125409 (Histone PARylation Factor 1 Pseudogene) is a Pseudogene.

Additional gene information for LOC100125409 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100125409 Gene

Genomics for LOC100125409 Gene

GeneHancer (GH) Regulatory Elements for LOC100125409 Gene

Promoters and enhancers for LOC100125409 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I070052 Enhancer 1.2 Ensembl ENCODE 0.2 -60.7 -60655 1.2 FOXA2 ARNT YY1 ZNF766 FOS REST ZNF592 MIER3 SMARCA4 NBN KCNMB4 CNOT2 LOC100125409 ENSG00000257241 ENSG00000257815
GH12I070048 Enhancer 1 Ensembl ENCODE 0.2 -63.8 -63769 2.8 ATF1 SMAD1 BMI1 KLF5 ATF7 ETV6 FOS IKZF2 RUNX3 ZNF592 KCNMB4 ENSG00000257815 LOC105369826 RAB3IP LINC01481 LOC100125409 ENSG00000257241
GH12I069986 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.1 -125.4 -125390 2.7 PKNOX1 ZSCAN4 ZNF76 ZNF143 FOS RCOR1 KLF13 CEBPB ZNF398 ZEB2 CCT2 MYRFL ENSG00000257815 RAB3IP ENSG00000257241 LOC100125409
GH12I069965 Enhancer 1 FANTOM5 ENCODE dbSUPER 0.1 -147.0 -146952 2.8 SREBF1 ZNF664 JUND RFX1 FOSL2 FOS ENSG00000257815 RAB3IP ENSG00000257241 LOC100125409
GH12I069994 Enhancer 0.8 FANTOM5 ENCODE 0.1 -119.1 -119053 1.3 ZNF335 MEIS2 NFIC PKNOX1 PRDM6 BHLHE40 HNF4G HNF4A CCT2 MYRFL ENSG00000257815 RAB3IP ENSG00000257241 LOC100125409
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100125409 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100125409 Gene

Genomic Locations for LOC100125409 Gene
chr12:70,113,763-70,114,308
(GRCh38/hg38)
Size:
546 bases
Orientation:
Plus strand
chr12:70,507,543-70,508,088
(GRCh37/hg19)

Genomic View for LOC100125409 Gene

Genes around LOC100125409 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100125409 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100125409 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100125409 Gene

Proteins for LOC100125409 Gene

Post-translational modifications for LOC100125409 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100125409 Gene

Domains & Families for LOC100125409 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100125409 Gene

Function for LOC100125409 Gene

Phenotypes From GWAS Catalog for LOC100125409 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100125409 Gene

Localization for LOC100125409 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100125409 Gene

Pathways & Interactions for LOC100125409 Gene

SuperPathways for LOC100125409 Gene

No Data Available

Interacting Proteins for LOC100125409 Gene

Gene Ontology (GO) - Biological Process for LOC100125409 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100125409 Gene

Drugs & Compounds for LOC100125409 Gene

No Compound Related Data Available

Transcripts for LOC100125409 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100125409 Gene

No ASD Table

Relevant External Links for LOC100125409 Gene

GeneLoc Exon Structure for
LOC100125409

No data available for mRNA/cDNA for LOC100125409 Gene

Expression for LOC100125409 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100125409 Gene

Orthologs for LOC100125409 Gene

No data available for Orthologs and Evolution for LOC100125409 Gene

Paralogs for LOC100125409 Gene

No data available for Paralogs for LOC100125409 Gene

Variants for LOC100125409 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100125409 Gene

Disorders for LOC100125409 Gene

No disorders were found for LOC100125409 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100125409 Gene

Publications for LOC100125409 Gene

No publications were found for LOC100125409 Gene.

Products for LOC100125409 Gene

Sources for LOC100125409 Gene

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