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Aliases for LOC100125393 Gene

Aliases for LOC100125393 Gene

  • TIMELESS Interacting Protein Pseudogene 3
  • AC012182.1 5

External Ids for LOC100125393 Gene

Previous GeneCards Identifiers for LOC100125393 Gene

  • GC16U900674
  • GC16M056682
  • GC16M058125

Summaries for LOC100125393 Gene

GeneCards Summary for LOC100125393 Gene

LOC100125393 (TIMELESS Interacting Protein Pseudogene) is a Pseudogene.

Additional gene information for LOC100125393 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100125393 Gene

Genomics for LOC100125393 Gene

GeneHancer (GH) Regulatory Elements for LOC100125393 Gene

Promoters and enhancers for LOC100125393 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J058093 Enhancer 0.3 FANTOM5 650.7 -0.6 -550 0.3 PRDM1 LOC100125393 GC16M058092 CFAP20 ENSG00000260545
GH16J057626 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 14.6 +464.2 464205 4.8 HDGF PKNOX1 ARNT SIN3A YBX1 ZNF2 ZNF766 ZNF416 ZNF207 ZNF548 ADGRG1 RSPRY1 LOC101927556 POLR2C NUP93 LOC105371286 SETD6 LOC100421594 LOC100125393 ENSG00000260148
GH16J058097 Enhancer 0.7 ENCODE 0.7 -4.4 -4422 0.2 ELF3 CTCF TFAP4 RB1 ARID4B CEBPG RAD21 SMC3 ZNF143 SCRT1 CNGB1 PRSS54 LOC100125393 ENSG00000260545 GC16M058096
GH16J058110 Enhancer 0.9 Ensembl ENCODE 0.4 -17.8 -17814 1.1 ZIC2 ZNF335 ZFHX2 GLIS2 ZBTB48 SCRT2 PRDM10 ZBTB20 EGR2 ZNF398 CFAP20 ENSG00000260545 LOC100125393 GC16M058096
GH16J058099 Enhancer 0.7 ENCODE dbSUPER 0.4 -6.8 -6794 1.1 RFX1 ZNF341 PRDM10 EGR2 CNGB1 PRSS54 MMP15 TEPP LOC100125393 ENSG00000260545 GC16M058096
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100125393 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100125393 Gene

Genomic Locations for LOC100125393 Gene
chr16:58,091,116-58,092,990
(GRCh38/hg38)
Size:
1,875 bases
Orientation:
Minus strand
chr16:58,125,020-58,126,894
(GRCh37/hg19)
Size:
1,875 bases
Orientation:
Minus strand

Genomic View for LOC100125393 Gene

Genes around LOC100125393 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100125393 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100125393 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100125393 Gene

Proteins for LOC100125393 Gene

Post-translational modifications for LOC100125393 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100125393 Gene

Domains & Families for LOC100125393 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100125393 Gene

Function for LOC100125393 Gene

Phenotypes From GWAS Catalog for LOC100125393 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100125393 Gene

Localization for LOC100125393 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100125393 Gene

Pathways & Interactions for LOC100125393 Gene

SuperPathways for LOC100125393 Gene

No Data Available

Interacting Proteins for LOC100125393 Gene

Gene Ontology (GO) - Biological Process for LOC100125393 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100125393 Gene

Drugs & Compounds for LOC100125393 Gene

No Compound Related Data Available

Transcripts for LOC100125393 Gene

mRNA/cDNA for LOC100125393 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100125393 Gene

No ASD Table

Relevant External Links for LOC100125393 Gene

GeneLoc Exon Structure for
LOC100125393

Expression for LOC100125393 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100125393 Gene

genes like me logo Genes that share expression patterns with LOC100125393: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100125393 Gene

Orthologs for LOC100125393 Gene

Evolution for LOC100125393 Gene

ENSEMBL:
Gene Tree for LOC100125393 (if available)
TreeFam:
Gene Tree for LOC100125393 (if available)

No data available for Orthologs for LOC100125393 Gene

Paralogs for LOC100125393 Gene

No data available for Paralogs for LOC100125393 Gene

Variants for LOC100125393 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100125393 Gene

Disorders for LOC100125393 Gene

No disorders were found for LOC100125393 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100125393 Gene

Publications for LOC100125393 Gene

No publications were found for LOC100125393 Gene.

Products for LOC100125393 Gene

Sources for LOC100125393 Gene

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