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Aliases for LOC100124373 Gene

Subcategory (RNA class) for LOC100124373 Gene

antisense

Aliases for LOC100124373 Gene

  • Ankyrin Repeat Domain 39 Pseudogene 3
  • AL136087.1 5

External Ids for LOC100124373 Gene

ORGUL Members for LOC100124373 Gene

Previous GeneCards Identifiers for LOC100124373 Gene

  • GC06U901081
  • GC06P039430
  • GC06P039322

Summaries for LOC100124373 Gene

GeneCards Summary for LOC100124373 Gene

LOC100124373 (Ankyrin Repeat Domain 39 Pseudogene) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for LOC100124373 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100124373 Gene

Genomics for LOC100124373 Gene

GeneHancer (GH) Regulatory Elements for LOC100124373 Gene

Promoters and enhancers for LOC100124373 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I039358 Enhancer 0.6 Ensembl dbSUPER 0.8 +4.6 4553 0.2 OSR2 NFIC NFIA KCNK17 KCNK16 LOC100124373 GC06M039593 KIF6
GH06I039361 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +8.7 8675 1.1 CTCF TFAP4 MXI1 ESRRA RB1 MAX ZNF48 RAD21 ZNF335 ZNF207 KCNK17 KCNK16 LOC100124373 GC06M039593 KIF6
GH06I039342 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 -10.6 -10589 1.5 PKNOX1 USF1 PRDM10 LOC100124373 KCNK16 LOC105375047 GC06M039593 KIF6
GH06I039349 Enhancer 0.3 FANTOM5 0.8 -4.1 -4098 0 LOC100124373 KCNK16 GC06M039593 KIF6
GH06I039335 Enhancer 0.6 Ensembl dbSUPER 0.4 -17.6 -17579 0.8 ETV1 RUNX3 NR2F2 KCNK17 KCNK16 LOC100124373 LOC105375047 GC06M039593 KIF6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100124373 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100124373 Gene

Genomic Locations for LOC100124373 Gene
chr6:39,353,747-39,354,498
(GRCh38/hg38)
Size:
752 bases
Orientation:
Plus strand
chr6:39,321,523-39,322,274
(GRCh37/hg19)

Genomic View for LOC100124373 Gene

Genes around LOC100124373 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100124373 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100124373 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100124373 Gene

Proteins for LOC100124373 Gene

Post-translational modifications for LOC100124373 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100124373 Gene

Domains & Families for LOC100124373 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100124373 Gene

Function for LOC100124373 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100124373 Gene

Localization for LOC100124373 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100124373 Gene

Pathways & Interactions for LOC100124373 Gene

SuperPathways for LOC100124373 Gene

No Data Available

Interacting Proteins for LOC100124373 Gene

Gene Ontology (GO) - Biological Process for LOC100124373 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100124373 Gene

Drugs & Compounds for LOC100124373 Gene

No Compound Related Data Available

Transcripts for LOC100124373 Gene

mRNA/cDNA for LOC100124373 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100124373 Gene

No ASD Table

Relevant External Links for LOC100124373 Gene

GeneLoc Exon Structure for
LOC100124373

Expression for LOC100124373 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100124373 Gene

genes like me logo Genes that share expression patterns with LOC100124373: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100124373 Gene

Orthologs for LOC100124373 Gene

Evolution for LOC100124373 Gene

ENSEMBL:
Gene Tree for LOC100124373 (if available)
TreeFam:
Gene Tree for LOC100124373 (if available)

No data available for Orthologs for LOC100124373 Gene

Paralogs for LOC100124373 Gene

No data available for Paralogs for LOC100124373 Gene

Variants for LOC100124373 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100124373 Gene

Disorders for LOC100124373 Gene

No disorders were found for LOC100124373 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100124373 Gene

Publications for LOC100124373 Gene

No publications were found for LOC100124373 Gene.

Products for LOC100124373 Gene

Sources for LOC100124373 Gene

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