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Aliases for LOC100113397 Gene

Aliases for LOC100113397 Gene

  • Vezatin, Adherens Junctions Transmembrane Protein Pseudogene 3
  • AL139811.1 5

External Ids for LOC100113397 Gene

Previous GeneCards Identifiers for LOC100113397 Gene

  • GC0XU900861
  • GC0XM046197
  • GC0XM046312

Summaries for LOC100113397 Gene

GeneCards Summary for LOC100113397 Gene

LOC100113397 (Vezatin, Adherens Junctions Transmembrane Protein Pseudogene) is a Pseudogene.

Additional gene information for LOC100113397 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100113397 Gene

Genomics for LOC100113397 Gene

GeneHancer (GH) Regulatory Elements for LOC100113397 Gene

Promoters and enhancers for LOC100113397 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ046457 Enhancer 0.2 FANTOM5 650.7 -0.1 -131 0.3 LOC100113397 GC0XP046460 KRBOX4
GH0XJ046456 Enhancer 0.2 FANTOM5 650.7 +0.4 376 0.3 LOC100113397 KRBOX4
GH0XJ047216 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 48.8 -761.3 -761275 5 HDGF PKNOX1 CLOCK ARNT SIN3A FEZF1 ZNF2 IRF4 YY1 POLR2B LOC105373194 CDK16 LOC100113397 ZNF81 ZNF182 INE1 LINC01560 ZNF674-AS1 UBA1 RBM10
GH0XJ046544 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 39.8 -89.2 -89232 4.6 HDGF PKNOX1 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 POLR2B ZNF674-AS1 ZNF674 CHST7 LOC100113397 LINC01560 INE1 LOC392452 SLC9A7 NUS1P1 ZNF41
GH0XJ047128 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE 27.7 -672.4 -672357 2 PKNOX1 ATF1 SMAD1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 BRCA1 YY1 RBM10 LOC105373193 INE1 LOC100113397 ZNF81 ZNF182 UBA1 NUS1P1 ARAF GC0XP047146
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100113397 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100113397 Gene

Genomic Locations for LOC100113397 Gene
chrX:46,453,460-46,457,244
(GRCh38/hg38)
Size:
3,785 bases
Orientation:
Minus strand
chrX:46,312,895-46,316,675
(GRCh37/hg19)
Size:
3,781 bases
Orientation:
Minus strand

Genomic View for LOC100113397 Gene

Genes around LOC100113397 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100113397 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100113397 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100113397 Gene

Proteins for LOC100113397 Gene

Post-translational modifications for LOC100113397 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100113397 Gene

Domains & Families for LOC100113397 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100113397 Gene

Function for LOC100113397 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100113397 Gene

Localization for LOC100113397 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100113397 Gene

Pathways & Interactions for LOC100113397 Gene

SuperPathways for LOC100113397 Gene

No Data Available

Interacting Proteins for LOC100113397 Gene

Gene Ontology (GO) - Biological Process for LOC100113397 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100113397 Gene

Drugs & Compounds for LOC100113397 Gene

No Compound Related Data Available

Transcripts for LOC100113397 Gene

mRNA/cDNA for LOC100113397 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100113397 Gene

No ASD Table

Relevant External Links for LOC100113397 Gene

GeneLoc Exon Structure for
LOC100113397

Expression for LOC100113397 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100113397 Gene

genes like me logo Genes that share expression patterns with LOC100113397: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100113397 Gene

Orthologs for LOC100113397 Gene

Evolution for LOC100113397 Gene

ENSEMBL:
Gene Tree for LOC100113397 (if available)
TreeFam:
Gene Tree for LOC100113397 (if available)

No data available for Orthologs for LOC100113397 Gene

Paralogs for LOC100113397 Gene

No data available for Paralogs for LOC100113397 Gene

Variants for LOC100113397 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100113397 Gene

Disorders for LOC100113397 Gene

No disorders were found for LOC100113397 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100113397 Gene

Publications for LOC100113397 Gene

No publications were found for LOC100113397 Gene.

Products for LOC100113397 Gene

Sources for LOC100113397 Gene

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