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Aliases for LOC100101478 Gene

Aliases for LOC100101478 Gene

  • H2B Histone Family Member M Pseudogene 3

External Ids for LOC100101478 Gene

Previous GeneCards Identifiers for LOC100101478 Gene

  • GC0XU900873
  • GC0XM103201
  • GC0XM103315

Summaries for LOC100101478 Gene

GeneCards Summary for LOC100101478 Gene

LOC100101478 (H2B Histone Family Member M Pseudogene) is a Pseudogene.

Additional gene information for LOC100101478 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100101478 Gene

Genomics for LOC100101478 Gene

GeneHancer (GH) Regulatory Elements for LOC100101478 Gene

Promoters and enhancers for LOC100101478 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI104039 Promoter 0.7 EPDnew 0.3 +22.9 22913 0.1 L3MBTL2 CREM H2BFM LOC100101478
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100101478 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100101478 Gene

Genomic Locations for LOC100101478 Gene
chrX:104,060,504-104,062,938
(GRCh38/hg38)
Size:
2,435 bases
Orientation:
Minus strand
chrX:103,315,219-103,317,601
(GRCh37/hg19)

Genomic View for LOC100101478 Gene

Genes around LOC100101478 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100101478 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100101478 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100101478 Gene

Proteins for LOC100101478 Gene

Post-translational modifications for LOC100101478 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100101478 Gene

Domains & Families for LOC100101478 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100101478 Gene

Function for LOC100101478 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100101478 Gene

Localization for LOC100101478 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100101478 Gene

Pathways & Interactions for LOC100101478 Gene

SuperPathways for LOC100101478 Gene

No Data Available

Interacting Proteins for LOC100101478 Gene

Gene Ontology (GO) - Biological Process for LOC100101478 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100101478 Gene

Drugs & Compounds for LOC100101478 Gene

No Compound Related Data Available

Transcripts for LOC100101478 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100101478 Gene

No ASD Table

Relevant External Links for LOC100101478 Gene

GeneLoc Exon Structure for
LOC100101478

No data available for mRNA/cDNA for LOC100101478 Gene

Expression for LOC100101478 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100101478 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100101478 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x7.9) and Brain - Cerebellum (x7.8).
genes like me logo Genes that share expression patterns with LOC100101478: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100101478 Gene

Orthologs for LOC100101478 Gene

No data available for Orthologs and Evolution for LOC100101478 Gene

Paralogs for LOC100101478 Gene

No data available for Paralogs for LOC100101478 Gene

Variants for LOC100101478 Gene

Sequence variations from dbSNP and Humsavar for LOC100101478 Gene

SNP ID Clin Chr 0X pos Variation AA Info Type
rs111551077 -- 104,063,728(-) A/G upstream_transcript_variant
rs1180760 -- 104,064,930(-) A/G upstream_transcript_variant
rs148308791 -- 104,064,505(-) G/A upstream_transcript_variant
rs200049439 -- 104,061,997(-) A/G intron_variant
rs200449810 -- 104,064,789(-) C/A upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100101478 Gene

Disorders for LOC100101478 Gene

Additional Disease Information for LOC100101478

No disorders were found for LOC100101478 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC100101478 Gene

Publications for LOC100101478 Gene

  1. Every amino acid matters: essential contributions of histone variants to mammalian development and disease. (PMID: 24614311) Maze I … Allis CD (Nature reviews. Genetics 2014) 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for LOC100101478 Gene

Sources for LOC100101478 Gene

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