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Aliases for LOC100101247 Gene

Aliases for LOC100101247 Gene

  • Interferon Induced Transmembrane Protein Pseudogene 3
  • AL031577.1 5

External Ids for LOC100101247 Gene

Previous GeneCards Identifiers for LOC100101247 Gene

  • GC06U901065
  • GC06M034651
  • GC06M034543
  • GC06M034667
  • GC06M035576
  • GC06M036291
  • GC06M036660
  • GC06M037013
  • GC06M037363
  • GC06M037719

Summaries for LOC100101247 Gene

GeneCards Summary for LOC100101247 Gene

LOC100101247 (Interferon Induced Transmembrane Protein Pseudogene) is a Pseudogene.

Additional gene information for LOC100101247 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100101247 Gene

Genomics for LOC100101247 Gene

GeneHancer (GH) Regulatory Elements for LOC100101247 Gene

Promoters and enhancers for LOC100101247 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I034575 Enhancer 0.8 ENCODE dbSUPER 550.8 +1.3 1258 0.1 CTCF KLF1 ZIC2 EGR1 VEZF1 GABPB1 KLF9 PRDM10 KLF8 EGR2 LOC100101247 GC06M038603 SPDEF
GH06I034042 Enhancer 0.3 dbSUPER 4.2 +533.4 533438 1.4 MAFK LOC100101247 PIR53321 GRM4
GH06I034579 Enhancer 0.4 dbSUPER 0.8 -3.2 -3151 1.2 MEIS2 WT1 SPDEF UHRF1BP1 GRM4 LOC100101247 GC06M038611
GH06I034581 Enhancer 0.2 ENCODE 0.8 -4.5 -4482 0.2 SPDEF GRM4 LOC100101247 GC06M038611
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100101247 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100101247 Gene

Genomic Locations for LOC100101247 Gene
chr6:34,576,101-34,576,757
(GRCh38/hg38)
Size:
657 bases
Orientation:
Minus strand
chr6:34,543,878-34,544,534
(GRCh37/hg19)

Genomic View for LOC100101247 Gene

Genes around LOC100101247 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100101247 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100101247 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100101247 Gene

Proteins for LOC100101247 Gene

Post-translational modifications for LOC100101247 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100101247 Gene

Domains & Families for LOC100101247 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100101247 Gene

Function for LOC100101247 Gene

Phenotypes From GWAS Catalog for LOC100101247 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100101247 Gene

Localization for LOC100101247 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100101247 Gene

Pathways & Interactions for LOC100101247 Gene

SuperPathways for LOC100101247 Gene

No Data Available

Interacting Proteins for LOC100101247 Gene

Gene Ontology (GO) - Biological Process for LOC100101247 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100101247 Gene

Drugs & Compounds for LOC100101247 Gene

No Compound Related Data Available

Transcripts for LOC100101247 Gene

mRNA/cDNA for LOC100101247 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100101247 Gene

No ASD Table

Relevant External Links for LOC100101247 Gene

GeneLoc Exon Structure for
LOC100101247

Expression for LOC100101247 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100101247 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100101247 Gene

This gene is overexpressed in Prostate (x5.6).
genes like me logo Genes that share expression patterns with LOC100101247: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100101247 Gene

Orthologs for LOC100101247 Gene

Evolution for LOC100101247 Gene

ENSEMBL:
Gene Tree for LOC100101247 (if available)
TreeFam:
Gene Tree for LOC100101247 (if available)

No data available for Orthologs for LOC100101247 Gene

Paralogs for LOC100101247 Gene

No data available for Paralogs for LOC100101247 Gene

Variants for LOC100101247 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100101247 Gene

Disorders for LOC100101247 Gene

No disorders were found for LOC100101247 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100101247 Gene

Publications for LOC100101247 Gene

No publications were found for LOC100101247 Gene.

Products for LOC100101247 Gene

Sources for LOC100101247 Gene

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