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Aliases for LOC100101148 Gene

Aliases for LOC100101148 Gene

  • FK506 Binding Protein 6, 36kDa Pseudogene 3
  • AC211476.1 5

External Ids for LOC100101148 Gene

Previous GeneCards Identifiers for LOC100101148 Gene

  • GC07U901819
  • GC07P072081
  • GC07P072441
  • GC07P072446

Summaries for LOC100101148 Gene

GeneCards Summary for LOC100101148 Gene

LOC100101148 (FK506 Binding Protein 6, 36kDa Pseudogene) is a Pseudogene.

Additional gene information for LOC100101148 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100101148 Gene

Genomics for LOC100101148 Gene

GeneHancer (GH) Regulatory Elements for LOC100101148 Gene

Promoters and enhancers for LOC100101148 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I072968 Enhancer 0.2 Ensembl 550.8 -0.1 -149 1.4 LOC100101148 PIR55723 TRIM74 NSUN5P2 STAG3L3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100101148 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100101148 Gene

Genomic Locations for LOC100101148 Gene
chr7:72,969,682-72,973,143
(GRCh38/hg38)
Size:
3,462 bases
Orientation:
Plus strand
chr7:72,440,213-72,442,259
(GRCh37/hg19)

Genomic View for LOC100101148 Gene

Genes around LOC100101148 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100101148 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100101148 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100101148 Gene

Proteins for LOC100101148 Gene

Post-translational modifications for LOC100101148 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100101148 Gene

Domains & Families for LOC100101148 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100101148 Gene

Function for LOC100101148 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100101148 Gene

Localization for LOC100101148 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100101148 Gene

Pathways & Interactions for LOC100101148 Gene

SuperPathways for LOC100101148 Gene

No Data Available

Interacting Proteins for LOC100101148 Gene

Gene Ontology (GO) - Biological Process for LOC100101148 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100101148 Gene

Drugs & Compounds for LOC100101148 Gene

No Compound Related Data Available

Transcripts for LOC100101148 Gene

mRNA/cDNA for LOC100101148 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100101148 Gene

No ASD Table

Relevant External Links for LOC100101148 Gene

GeneLoc Exon Structure for
LOC100101148

Expression for LOC100101148 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100101148 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100101148 Gene

This gene is overexpressed in Testis (x11.0).
genes like me logo Genes that share expression patterns with LOC100101148: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100101148 Gene

Orthologs for LOC100101148 Gene

Evolution for LOC100101148 Gene

ENSEMBL:
Gene Tree for LOC100101148 (if available)
TreeFam:
Gene Tree for LOC100101148 (if available)

No data available for Orthologs for LOC100101148 Gene

Paralogs for LOC100101148 Gene

No data available for Paralogs for LOC100101148 Gene

Variants for LOC100101148 Gene

Sequence variations from dbSNP and Humsavar for LOC100101148 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs10240489 -- 72,971,507(+) C/T intron_variant
rs10240494 -- 72,971,518(+) C/T intron_variant
rs10240512 -- 72,971,557(+) C/T non_coding_transcript_variant
rs10240526 -- 72,971,590(+) C/T intron_variant
rs10240800 -- 72,971,721(+) C/A/G/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC100101148 Gene

Variant ID Type Subtype PubMed ID
dgv6464n100 CNV gain 25217958
esv2759537 CNV gain+loss 17122850
esv2764061 CNV gain+loss 21179565
esv34349 CNV gain 17911159
esv3613678 CNV loss 21293372
nsv1018175 CNV gain 25217958
nsv1018460 CNV gain+loss 25217958
nsv1023115 CNV gain 25217958
nsv1029162 CNV loss 25217958
nsv1030447 CNV loss 25217958
nsv1161563 CNV deletion 26073780
nsv428171 CNV gain 18775914
nsv469664 CNV loss 16826518
nsv520573 CNV gain+loss 19592680
nsv528969 CNV gain 19592680
nsv607478 CNV loss 21841781
nsv831025 CNV loss 17160897
nsv831035 CNV loss 17160897
nsv970875 CNV duplication 23825009
nsv981535 CNV duplication 23825009

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC100101148 Gene

Disorders for LOC100101148 Gene

Additional Disease Information for LOC100101148

No disorders were found for LOC100101148 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC100101148 Gene

Publications for LOC100101148 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
  2. Toward a complete human genome sequence. (PMID: 9847074) Sanger Center … Genome Sequencing Center (Genome research 1998) 3 58

Products for LOC100101148 Gene

Sources for LOC100101148 Gene

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