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Aliases for LOC100101127 Gene

Aliases for LOC100101127 Gene

  • Thioredoxin Related Transmembrane Protein 1 Pseudogene 3
  • AC079089.3 5

External Ids for LOC100101127 Gene

Previous GeneCards Identifiers for LOC100101127 Gene

  • GC08U900818
  • GC08P070868
  • GC08P070706

Summaries for LOC100101127 Gene

GeneCards Summary for LOC100101127 Gene

LOC100101127 (Thioredoxin Related Transmembrane Protein 1 Pseudogene) is a Pseudogene.

Additional gene information for LOC100101127 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100101127 Gene

Genomics for LOC100101127 Gene

GeneHancer (GH) Regulatory Elements for LOC100101127 Gene

Promoters and enhancers for LOC100101127 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J069832 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.3 +39.9 39880 3.4 HDGF PKNOX1 FEZF1 GLI4 ZNF2 YY1 ZNF121 GLIS2 ZNF213 ZNF207 SLCO5A1 LOC101929759 LOC100129096 NCOA2 LOC100101127 GC08P069795
GH08J069763 Enhancer 1 Ensembl ENCODE 0.3 -29.7 -29653 1 HDGF PKNOX1 FOXA2 BMI1 KLF5 ZNF366 ATF7 IKZF2 EGR2 SMARCA5 LOC101929759 SLCO5A1 RN7SKP29 LOC105375889 LOC100101127 GC08P069795
GH08J069760 Enhancer 0.6 ENCODE 0.3 -33.1 -33141 0.2 SMARCA5 JUNB EBF1 DPF2 BATF RELA IKZF1 EED RUNX3 IKZF2 SLCO5A1 LOC101929759 RN7SKP29 LOC100101127 GC08P069795 LOC105375889
GH08J069810 Enhancer 0.4 ENCODE 0.4 +17.4 17373 1.2 EBF1 MLLT1 LOC101929759 SLCO5A1 RN7SKP29 GC08P069795 LOC100101127
GH08J069809 Enhancer 0.4 ENCODE 0.4 +15.9 15919 0.5 GLIS1 MLLT1 LOC101929759 SLCO5A1 RN7SKP29 GC08P069795 LOC100101127
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC100101127 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100101127 Gene

Genomic Locations for LOC100101127 Gene
chr8:69,794,062-69,800,242
(GRCh38/hg38)
Size:
6,181 bases
Orientation:
Plus strand
chr8:70,706,297-70,712,477
(GRCh37/hg19)
Size:
6,181 bases
Orientation:
Plus strand

Genomic View for LOC100101127 Gene

Genes around LOC100101127 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100101127 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100101127 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100101127 Gene

Proteins for LOC100101127 Gene

Post-translational modifications for LOC100101127 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100101127 Gene

Domains & Families for LOC100101127 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100101127 Gene

Function for LOC100101127 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100101127 Gene

Localization for LOC100101127 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100101127 Gene

Pathways & Interactions for LOC100101127 Gene

SuperPathways for LOC100101127 Gene

No Data Available

Interacting Proteins for LOC100101127 Gene

Gene Ontology (GO) - Biological Process for LOC100101127 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100101127 Gene

Drugs & Compounds for LOC100101127 Gene

No Compound Related Data Available

Transcripts for LOC100101127 Gene

mRNA/cDNA for LOC100101127 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100101127 Gene

No ASD Table

Relevant External Links for LOC100101127 Gene

GeneLoc Exon Structure for
LOC100101127

Expression for LOC100101127 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100101127 Gene

genes like me logo Genes that share expression patterns with LOC100101127: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100101127 Gene

Orthologs for LOC100101127 Gene

Evolution for LOC100101127 Gene

ENSEMBL:
Gene Tree for LOC100101127 (if available)
TreeFam:
Gene Tree for LOC100101127 (if available)

No data available for Orthologs for LOC100101127 Gene

Paralogs for LOC100101127 Gene

No data available for Paralogs for LOC100101127 Gene

Variants for LOC100101127 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC100101127 Gene

Disorders for LOC100101127 Gene

No disorders were found for LOC100101127 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100101127 Gene

Publications for LOC100101127 Gene

No publications were found for LOC100101127 Gene.

Products for LOC100101127 Gene

Sources for LOC100101127 Gene

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