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Aliases for LL22NC03-104C7.1 Gene

Subcategory (RNA class) for LL22NC03-104C7.1 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LL22NC03-104C7.1 Gene

  • Uncharacterized LL22NC03-104C7.1 3

External Ids for LL22NC03-104C7.1 Gene

Previous GeneCards Identifiers for LL22NC03-104C7.1 Gene

  • GC22U901254

Summaries for LL22NC03-104C7.1 Gene

GeneCards Summary for LL22NC03-104C7.1 Gene

LL22NC03-104C7.1 (Uncharacterized LL22NC03-104C7.1) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LL22NC03-104C7.1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LL22NC03-104C7.1 Gene

Genomics for LL22NC03-104C7.1 Gene

GeneHancer (GH) Regulatory Elements for LL22NC03-104C7.1 Gene

Promoters and enhancers for LL22NC03-104C7.1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J032582 Enhancer 1.2 Ensembl ENCODE dbSUPER 550.7 +1.6 1563 2.9 NR2F6 SP1 CEBPG TRIM24 CREB1 RXRA ATF7 GABPA SCRT2 MBD1 ENSG00000236054 LL22NC03-104C7.1 ENSG00000229673 LOC105373003 SYN3
GH22J032579 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.7 -2.6 -2590 1.7 SP1 CREB1 NCOA3 RXRA CTBP1 FOS DPF2 YY1 ESRRA RAD21 ENSG00000236054 LL22NC03-104C7.1 GC22M032500 SYN3
GH22J032575 Enhancer 1 ENCODE dbSUPER 0.4 -6.4 -6423 1.1 DACH1 ZFX CBFA2T2 TEAD4 SMARCA4 MTA1 IKZF1 DPF2 ZNF148 ZNF740 LL22NC03-104C7.1 GC22M032500 SYN3
GH22J032557 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 -24.4 -24369 2.5 MAFK KLF14 CREB1 GLIS2 NCOA3 FOSL2 PKNOX1 CTBP1 ZNF629 BRCA1 ENSG00000236054 TIMP3 LL22NC03-104C7.1 GC22M032500 SYN3
GH22J032528 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -50.9 -50854 7.2 RAD21 NR2F6 SP1 ZFX CBFA2T2 L3MBTL2 KLF14 IKZF1 HNF1A ZNF384 TIMP3 ENSG00000229673 ENSG00000236054 FBXO7 GC22M032500 LL22NC03-104C7.1 SYN3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LL22NC03-104C7.1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LL22NC03-104C7.1 Gene

Genomic Locations for LL22NC03-104C7.1 Gene
chr22:32,582,644-32,587,010
(GRCh38/hg38)
Size:
4,367 bases
Orientation:
Plus strand

Genomic View for LL22NC03-104C7.1 Gene

Genes around LL22NC03-104C7.1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LL22NC03-104C7.1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LL22NC03-104C7.1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LL22NC03-104C7.1 Gene

Proteins for LL22NC03-104C7.1 Gene

Post-translational modifications for LL22NC03-104C7.1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LL22NC03-104C7.1 Gene

Domains & Families for LL22NC03-104C7.1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LL22NC03-104C7.1 Gene

Function for LL22NC03-104C7.1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LL22NC03-104C7.1 Gene

Localization for LL22NC03-104C7.1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LL22NC03-104C7.1 Gene

Pathways & Interactions for LL22NC03-104C7.1 Gene

SuperPathways for LL22NC03-104C7.1 Gene

No Data Available

Interacting Proteins for LL22NC03-104C7.1 Gene

Gene Ontology (GO) - Biological Process for LL22NC03-104C7.1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LL22NC03-104C7.1 Gene

Drugs & Compounds for LL22NC03-104C7.1 Gene

No Compound Related Data Available

Transcripts for LL22NC03-104C7.1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LL22NC03-104C7.1 Gene

No ASD Table

Relevant External Links for LL22NC03-104C7.1 Gene

GeneLoc Exon Structure for
LL22NC03-104C7.1

No data available for mRNA/cDNA for LL22NC03-104C7.1 Gene

Expression for LL22NC03-104C7.1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LL22NC03-104C7.1 Gene

Orthologs for LL22NC03-104C7.1 Gene

No data available for Orthologs and Evolution for LL22NC03-104C7.1 Gene

Paralogs for LL22NC03-104C7.1 Gene

No data available for Paralogs for LL22NC03-104C7.1 Gene

Variants for LL22NC03-104C7.1 Gene

Sequence variations from dbSNP and Humsavar for LL22NC03-104C7.1 Gene

SNP ID Clin Chr 22 pos Variation AA Info Type
rs1000106171 -- 32,586,014(+) G/A downstream_transcript_variant, genic_downstream_transcript_variant, intron_variant
rs1000334091 -- 32,578,324(+) G/A upstream_transcript_variant
rs1000344749 -- 32,583,367(+) C/T intron_variant, non_coding_transcript_variant
rs1000448950 -- 32,577,893(+) C/G/T upstream_transcript_variant
rs1000666275 -- 32,579,704(+) C/A/T genic_upstream_transcript_variant, non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LL22NC03-104C7.1 Gene

Disorders for LL22NC03-104C7.1 Gene

No disorders were found for LL22NC03-104C7.1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LL22NC03-104C7.1 Gene

Publications for LL22NC03-104C7.1 Gene

No publications were found for LL22NC03-104C7.1 Gene.

Products for LL22NC03-104C7.1 Gene

Sources for LL22NC03-104C7.1 Gene

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