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Aliases for LL22NC03-102D1.18 Gene

Subcategory (RNA class) for LL22NC03-102D1.18 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LL22NC03-102D1.18 Gene

  • Uncharacterized LL22NC03-102D1.18 3

External Ids for LL22NC03-102D1.18 Gene

Summaries for LL22NC03-102D1.18 Gene

GeneCards Summary for LL22NC03-102D1.18 Gene

LL22NC03-102D1.18 (Uncharacterized LL22NC03-102D1.18) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LL22NC03-102D1.18 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LL22NC03-102D1.18 Gene

Genomics for LL22NC03-102D1.18 Gene

GeneHancer (GH) Regulatory Elements for LL22NC03-102D1.18 Gene

Promoters and enhancers for LL22NC03-102D1.18 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J022713 Promoter 0.9 Ensembl 600.7 -1.3 -1307 0.2 ZNF560 PRDM12 IKZF2 DPF2 ZNF623 ZC3H11A ZFP64 ZNF781 ZNF518A ZNF697 IGLV3-21 LL22NC03-102D1.18 TOP3B IGLV5-52 ENSG00000234630 ENSG00000272779 GNAZ ENSG00000225544 IGLVI-20 IGL
GH22J022712 Promoter 0.6 EPDnew 600.7 -0.8 -766 0.1 POLR2A LL22NC03-102D1.18 IGLV3-21 IGLL5 IGLVI-20 IGL
GH22J022710 Enhancer 0.6 ENCODE 600.7 +0.7 693 0.2 CTCF GTF2F1 SCRT2 LEF1 GATAD2A SMC3 RAD21 HIC1 XRCC5 RB1 LL22NC03-102D1.18 IGLV3-21 IGLV3-22 IGL
GH22J022711 Enhancer 0.6 ENCODE 600.7 +0.5 483 0.1 GTF2F1 CTCF SCRT2 GATAD2A HIC1 NUFIP1 XRCC5 RB1 DACH1 IGLV3-21 LL22NC03-102D1.18 IGLV3-22 IGL
GH22J022703 Enhancer 1 Ensembl ENCODE 0.4 +7.7 7727 3.5 CTCF MCM2 MAFK HNRNPUL1 PHF21A REST SP1 SCRT2 SNRNP70 CTBP1 IGLV3-22 TOP3B IGLV5-52 ENSG00000234630 IGLVVI-22-1 LL22NC03-102D1.18 IGL
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LL22NC03-102D1.18 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LL22NC03-102D1.18 Gene

Genomic Locations for LL22NC03-102D1.18 Gene
chr22:22,692,756-22,711,594
(GRCh38/hg38)
Size:
18,839 bases
Orientation:
Minus strand

Genomic View for LL22NC03-102D1.18 Gene

Genes around LL22NC03-102D1.18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LL22NC03-102D1.18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LL22NC03-102D1.18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LL22NC03-102D1.18 Gene

Proteins for LL22NC03-102D1.18 Gene

Post-translational modifications for LL22NC03-102D1.18 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LL22NC03-102D1.18 Gene

Domains & Families for LL22NC03-102D1.18 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LL22NC03-102D1.18 Gene

Function for LL22NC03-102D1.18 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LL22NC03-102D1.18 Gene

Localization for LL22NC03-102D1.18 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LL22NC03-102D1.18 Gene

Pathways & Interactions for LL22NC03-102D1.18 Gene

PathCards logo

SuperPathways for LL22NC03-102D1.18 Gene

No Data Available

Interacting Proteins for LL22NC03-102D1.18 Gene

Gene Ontology (GO) - Biological Process for LL22NC03-102D1.18 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LL22NC03-102D1.18 Gene

Drugs & Compounds for LL22NC03-102D1.18 Gene

No Compound Related Data Available

Transcripts for LL22NC03-102D1.18 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LL22NC03-102D1.18 Gene

No ASD Table

Relevant External Links for LL22NC03-102D1.18 Gene

GeneLoc Exon Structure for
LL22NC03-102D1.18

No data available for mRNA/cDNA for LL22NC03-102D1.18 Gene

Expression for LL22NC03-102D1.18 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LL22NC03-102D1.18 Gene

Orthologs for LL22NC03-102D1.18 Gene

No data available for Orthologs and Evolution for LL22NC03-102D1.18 Gene

Paralogs for LL22NC03-102D1.18 Gene

No data available for Paralogs for LL22NC03-102D1.18 Gene

Variants for LL22NC03-102D1.18 Gene

Sequence variations from dbSNP and Humsavar for LL22NC03-102D1.18 Gene

SNP ID Clin Chr 22 pos Variation AA Info Type
rs1000223378 -- 22,703,222(-) C/T intron_variant
rs1000377857 -- 22,698,500(-) C/T intron_variant
rs1000556889 -- 22,701,943(-) T/C intron_variant
rs1000595129 -- 22,703,469(-) A/G intron_variant
rs1000761978 -- 22,697,450(-) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LL22NC03-102D1.18 Gene

Disorders for LL22NC03-102D1.18 Gene

No disorders were found for LL22NC03-102D1.18 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LL22NC03-102D1.18 Gene

Publications for LL22NC03-102D1.18 Gene

No publications were found for LL22NC03-102D1.18 Gene.

No data available for External Links for LL22NC03-102D1.18 Gene

Products for LL22NC03-102D1.18 Gene

Sources for LL22NC03-102D1.18 Gene

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