Aliases for LINC02832 Gene

Data sources for LINC02832 Gene:

RNA type for LINC02832 Gene

lncRNA

Aliases for LINC02832 Gene

External Ids for LINC02832 Gene

Previous GeneCards Identifiers for LINC02832 Gene

  • GC02P219731

Summaries for LINC02832 Gene

GeneCards Summary for LINC02832 Gene

LINC02832 (Long Intergenic Non-Protein Coding RNA 2832) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02832 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02832 Gene

Genomics for LINC02832 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02832 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J219683 Promoter/Enhancer 1.6 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 +2.3 2349 7.4 ZNF654 ZNF600 ZNF592 POLR2A CTCF REST SMAD5 TRIM22 CHD2 TBP OBSL1 CHPF TMEM198 SLC4A3 ENSG00000228973 DNPEP DNAJB2 ATG9A DNAJB6P3 LINC02832
GH02J219706 Enhancer 0.9 Ensembl dbSUPER 0.4 +22.1 22127 1.9 ZNF600 ZNF10 NFIC CEBPB FEZF1 ZEB1 ZNF610 ZNF843 PRDM6 GLI4 HSALNG0022417-001 RPL23P4 LINC02832 SLC4A3
GH02J219698 Enhancer 0.7 Ensembl dbSUPER 0.4 +13.5 13475 2 CEBPA FOXA2 FOSL2 ARID3A ZNF384 RNF2 SOX13 POLR2A USF1 EZH2 RPL23P4 lnc-SLC4A3-12 DNPEP LINC02832 HSALNG0022417-001 SLC4A3
GH02J219722 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 +37.3 37254 0.4 NFIC ZNF217 MBD2 CTBP1 RARA SIN3A BCL6 JUND TCF7L2 PKNOX1 STK11IP HSALNG0022417-001 lnc-SLC4A3-3 LINC02832 SLC4A3
GH02J219702 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.4 +18.1 18075 4 CEBPA PKNOX1 HLF STK11IP RPL23P4 HSALNG0022417-001 LINC02832 SLC4A3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02832 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02832 Gene

Latest Assembly
chr2:219,685,326-219,940,883
(GRCh38/hg38)
Size:
255,558 bases
Orientation:
Plus strand

Previous Assembly
chr2:220,550,103-220,602,659
(GRCh37/hg19 by Ensembl)
Size:
52,557 bases
Orientation:
Plus strand

Genomic View for LINC02832 Gene

Genes around LINC02832 on UCSC Golden Path with GeneCards custom track
LINC02832 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC02832 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02832 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02832 Gene

Proteins for LINC02832 Gene

Post-translational modifications for LINC02832 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02832 Gene

Domains & Families for LINC02832 Gene

Gene Families for LINC02832 Gene

genes like me logo Genes that share domains with LINC02832: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02832 Gene

Function for LINC02832 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02832 Gene

Localization for LINC02832 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02832 Gene

Pathways & Interactions for LINC02832 Gene

PathCards logo

SuperPathways for LINC02832 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02832 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02832 Gene

Drugs & Compounds for LINC02832 Gene

No Compound Related Data Available

Transcripts for LINC02832 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02832 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00002CFE7E_9606 lncRNA 498 4

Ensembl: ENST00000416861 (view in UCSC) ,

LncBook: HSALNT0047553,

LNCipedia: lnc-SLC4A3-2:5,

NONCODE: NONHSAT077067.2,

URS0000237A52_9606 lncRNA 361 4

Ensembl: ENST00000442416 (view in UCSC) ,

LncBook: HSALNT0047563,

LNCipedia: lnc-SLC4A3-2:1,

NONCODE: NONHSAT077070.2,

URS000000774F_9606 lncRNA 1965 3

Ensembl: ENST00000607654 (view in UCSC) ,

LNCipedia: lnc-SLC4A3-2:2,

NONCODE: NONHSAT183605.1,

URS0000197BA3_9606 lncRNA 602 3

Ensembl: ENST00000606673 (view in UCSC) ,

LNCipedia: lnc-SLC4A3-2:3,

NONCODE: NONHSAT183606.1,

URS00008B7132_9606 lncRNA 528 3

LncBook: HSALNT0047573,

LNCipedia: lnc-SLC4A3-2:13,

NONCODE: NONHSAT077072.2,

LINC02832 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02832 Gene

No ASD Table

Relevant External Links for LINC02832 Gene

GeneLoc Exon Structure for
LINC02832

No data available for mRNA/cDNA for LINC02832 Gene

Expression for LINC02832 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02832 Gene

Orthologs for LINC02832 Gene

Evolution for LINC02832 Gene

ENSEMBL:
Gene Tree for LINC02832 (if available)
TreeFam:
Gene Tree for LINC02832 (if available)
Alliance of Genome Resources:
Additional Orthologs for LINC02832

No data available for Orthologs for LINC02832 Gene

Paralogs for LINC02832 Gene

No data available for Paralogs for LINC02832 Gene

Variants for LINC02832 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC02832 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LINC02832 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02832
Leiden Open Variation Database (LOVD)
LINC02832

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02832 Gene

Disorders for LINC02832 Gene

No disorders were found for LINC02832 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02832 Gene

Publications for LINC02832 Gene

No publications were found for LINC02832 Gene.

No data available for Mastermind for LINC02832 Gene

Products for LINC02832 Gene

Sources for LINC02832 Gene