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Aliases for LINC02826 Gene

Subcategory (RNA class) for LINC02826 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for LINC02826 Gene

  • Long Intergenic Non-Protein Coding RNA 2826 2 3
  • Novel Transcript 5
  • AC005186.1 5

External Ids for LINC02826 Gene

Summaries for LINC02826 Gene

GeneCards Summary for LINC02826 Gene

LINC02826 (Long Intergenic Non-Protein Coding RNA 2826) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC02826 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02826 Gene

Genomics for LINC02826 Gene

GeneHancer (GH) Regulatory Elements for LINC02826 Gene

Promoters and enhancers for LINC02826 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J125981 Promoter/Enhancer 1.3 Ensembl ENCODE 0.7 -2.3 -2272 3.9 CEBPG RERE SP1 SP5 KAT8 RXRA CEBPA GATAD2A RXRB FOXA2 LINC00939 LINC02826
GH12J126033 Enhancer 0.7 ENCODE 0.3 +49.6 49561 4.5 SP1 FOXA2 GABPA SOX13 IKZF1 NR2F1 FOXP1 ZNF614 GATA3 HNF4A LOC105370056 LINC00939 LINC02826 LINC02359
GH12J126027 Enhancer 0.5 ENCODE 0.3 +42.3 42262 1 CEBPB JUN RCOR1 JUND EP300 STAT3 TCF7L2 LINC00939 LOC105370056 LOC105370058 LINC02826
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02826 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02826 Gene

Genomic Locations for LINC02826 Gene
chr12:125,985,712-126,043,480
(GRCh38/hg38)
Size:
57,769 bases
Orientation:
Plus strand

Genomic View for LINC02826 Gene

Genes around LINC02826 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02826 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02826 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02826 Gene

Proteins for LINC02826 Gene

Post-translational modifications for LINC02826 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02826 Gene

Domains & Families for LINC02826 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02826 Gene

Function for LINC02826 Gene

Phenotypes From GWAS Catalog for LINC02826 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02826 Gene

Localization for LINC02826 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02826 Gene

Pathways & Interactions for LINC02826 Gene

PathCards logo

SuperPathways for LINC02826 Gene

No Data Available

Interacting Proteins for LINC02826 Gene

Gene Ontology (GO) - Biological Process for LINC02826 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02826 Gene

Drugs & Compounds for LINC02826 Gene

No Compound Related Data Available

Transcripts for LINC02826 Gene

mRNA/cDNA for LINC02826 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(3) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02826 Gene

No ASD Table

Relevant External Links for LINC02826 Gene

GeneLoc Exon Structure for
LINC02826
ECgene alternative splicing isoforms for
LINC02826

Expression for LINC02826 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02826 Gene

Orthologs for LINC02826 Gene

Evolution for LINC02826 Gene

ENSEMBL:
Gene Tree for LINC02826 (if available)
TreeFam:
Gene Tree for LINC02826 (if available)

No data available for Orthologs for LINC02826 Gene

Paralogs for LINC02826 Gene

No data available for Paralogs for LINC02826 Gene

Variants for LINC02826 Gene

Sequence variations from dbSNP and Humsavar for LINC02826 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000021720 -- 126,008,247(+) T/A intron_variant
rs1000058800 -- 126,024,525(+) C/T intron_variant
rs1000110070 -- 125,993,697(+) G/A genic_upstream_transcript_variant, intron_variant
rs1000150692 -- 126,010,080(+) AAA/AAAGAAAAAA intron_variant
rs1000239989 -- 126,003,511(+) G/T intron_variant

Additional Variant Information for LINC02826 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02826

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02826 Gene

Disorders for LINC02826 Gene

No disorders were found for LINC02826 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02826 Gene

Publications for LINC02826 Gene

No publications were found for LINC02826 Gene.

No data available for External Links for LINC02826 Gene

Products for LINC02826 Gene

Sources for LINC02826 Gene

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