Aliases for LINC02826 Gene

Subcategory (RNA class) for LINC02826 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC02826 Gene

  • Long Intergenic Non-Protein Coding RNA 2826 2 3 5
  • LINC02826 2 5
  • NONHSAG012673.2 91
  • NONHSAG012672.2 91
  • Lnc-TMEM132B-2 165
  • HSALNG0094922 164

External Ids for LINC02826 Gene

Summaries for LINC02826 Gene

GeneCards Summary for LINC02826 Gene

LINC02826 (Long Intergenic Non-Protein Coding RNA 2826) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02826 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02826 Gene

Genomics for LINC02826 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02826 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J125981 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE CraniofacialAtlas 600.7 -0.3 -262 3.9 GATAD2A REST RFX5 FOXA1 RXRB IRF2 SP1 GABPA CEBPA SOX13 LINC00939 LINC02826 lnc-TMEM132B-15 TMEM132B
GH12J126033 Enhancer 0.8 Ensembl ENCODE 0.2 +51.6 51571 4.5 FOXA1 SP1 GABPA SOX13 FOXA2 FOXP1 IKZF1 NR2F1 GATA3 RAD21 LINC00939 LOC105370056 LINC02826 LINC02359 TMEM132B
GH12J126027 Enhancer 0.5 ENCODE 0.3 +44.3 44272 1 CEBPB JUN RCOR1 JUND EP300 STAT3 TCF7L2 LINC00939 LOC105370056 lnc-DHX37-4 LINC02826 TMEM132B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02826 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02826 Gene

Genomic Locations for LINC02826 Gene
chr12:125,983,702-126,043,634
(GRCh38/hg38)
Size:
59,933 bases
Orientation:
Plus strand

Genomic View for LINC02826 Gene

Genes around LINC02826 on UCSC Golden Path with GeneCards custom track
LINC02826 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC02826 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02826 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02826 Gene

Proteins for LINC02826 Gene

Post-translational modifications for LINC02826 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02826 Gene

Domains & Families for LINC02826 Gene

Gene Families for LINC02826 Gene

genes like me logo Genes that share domains with LINC02826: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02826 Gene

Function for LINC02826 Gene

Phenotypes From GWAS Catalog for LINC02826 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02826 Gene

Localization for LINC02826 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02826 Gene

Pathways & Interactions for LINC02826 Gene

PathCards logo

SuperPathways for LINC02826 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02826 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02826 Gene

Drugs & Compounds for LINC02826 Gene

No Compound Related Data Available

Transcripts for LINC02826 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02826 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00006012C6_9606 lncRNA 570 4

Ensembl: ENST00000534849 (view in UCSC) ,

LncBook: HSALNT0196730,

LNCipedia: lnc-TMEM132B-2:11,

NONCODE: NONHSAT031734.2,

URS0000EEE510_9606 lncRNA 2977 2

HGNC: 54357,

Ensembl: ENST00000660252 (view in UCSC) ,

URS0000D6087B_9606 lncRNA 1529 2

Ensembl: ENST00000642407 (view in UCSC) ,

LNCipedia: lnc-TMEM132B-2:12,

URS0000767806_9606 lncRNA 677 2

Ensembl: ENST00000620193 (view in UCSC) ,

LNCipedia: lnc-TMEM132B-2:10,

URS0000EF6C0A_9606 lncRNA 1648 1

Ensembl: ENST00000653364 (view in UCSC) ,

LINC02826 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02826 Gene

No ASD Table

Relevant External Links for LINC02826 Gene

GeneLoc Exon Structure for
LINC02826

No data available for mRNA/cDNA for LINC02826 Gene

Expression for LINC02826 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02826 Gene

Orthologs for LINC02826 Gene

Evolution for LINC02826 Gene

ENSEMBL:
Gene Tree for LINC02826 (if available)
TreeFam:
Gene Tree for LINC02826 (if available)

No data available for Orthologs for LINC02826 Gene

Paralogs for LINC02826 Gene

No data available for Paralogs for LINC02826 Gene

Variants for LINC02826 Gene

Additional dbSNP identifiers (rs#s) for LINC02826 Gene

Additional Variant Information for LINC02826 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02826

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02826 Gene

Disorders for LINC02826 Gene

Additional Disease Information for LINC02826

No disorders were found for LINC02826 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02826 Gene

Publications for LINC02826 Gene

No publications were found for LINC02826 Gene.

No data available for Mastermind for LINC02826 Gene

Products for LINC02826 Gene

Sources for LINC02826 Gene