Aliases for LINC02823 Gene

Subcategory (RNA class) for LINC02823 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LINC02823 Gene

  • Long Intergenic Non-Protein Coding RNA 2823 2 3

External Ids for LINC02823 Gene

Summaries for LINC02823 Gene

GeneCards Summary for LINC02823 Gene

LINC02823 (Long Intergenic Non-Protein Coding RNA 2823) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LINC02823 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02823 Gene

Genomics for LINC02823 Gene

GeneHancer (GH) Regulatory Elements for LINC02823 Gene

Promoters and enhancers for LINC02823 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J091325 Enhancer 0.9 Ensembl ENCODE CraniofacialAtlas 750.6 +0.3 251 3.6 CTCF RAD21 POLR2A RFX5 SMC3 GATA3 JUND TEAD2 ENSG00000258100 LINC02823 KERA LOC105369898
GH12J091357 Enhancer 0.9 Ensembl ENCODE CraniofacialAtlas 0.3 +30.6 30629 1.1 NFYC ELF3 SP1 PKNOX1 CTBP1 POLR2A ZNF217 GATA3 ELF1 JUND LUM DCN LOC105369898 LINC02823 ENSG00000258100
GH12J091272 Enhancer 0.8 Ensembl ENCODE CraniofacialAtlas 0.2 -53.2 -53222 4.7 RFX1 RXRA POLR2A NR2F2 RAD21 DCN ENSG00000258100 HSALNG0093012 LINC02823 LOC105369898
GH12J091355 Enhancer 0.6 Ensembl 0.3 +28.5 28541 0.2 CTCF RAD21 ZC3H8 MAFK TRIM22 ZNF316 MAFG SMC3 ZNF143 RB1 LUM DCN LOC105369898 LINC02823 ENSG00000258100
GH12J091249 Enhancer 0.8 Ensembl ENCODE CraniofacialAtlas 0.2 -76.9 -76867 2.2 MAFK ZNF316 CEBPG EMSY DCN HSALNG0093012 LINC02823 LOC105369898
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02823 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02823 Gene

Genomic Locations for LINC02823 Gene
chr12:91,326,960-91,368,601
(GRCh38/hg38)
Size:
41,642 bases
Orientation:
Plus strand

Genomic View for LINC02823 Gene

Genes around LINC02823 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02823 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02823 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02823 Gene

Proteins for LINC02823 Gene

Post-translational modifications for LINC02823 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02823 Gene

Domains & Families for LINC02823 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02823 Gene

Function for LINC02823 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02823 Gene

Localization for LINC02823 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02823 Gene

Pathways & Interactions for LINC02823 Gene

PathCards logo

SuperPathways for LINC02823 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02823 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02823 Gene

Drugs & Compounds for LINC02823 Gene

No Compound Related Data Available

Transcripts for LINC02823 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02823 Gene

No ASD Table

Relevant External Links for LINC02823 Gene

GeneLoc Exon Structure for
LINC02823
ECgene alternative splicing isoforms for
LINC02823

No data available for mRNA/cDNA for LINC02823 Gene

Expression for LINC02823 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02823 Gene

Orthologs for LINC02823 Gene

No data available for Orthologs and Evolution for LINC02823 Gene

Paralogs for LINC02823 Gene

No data available for Paralogs for LINC02823 Gene

Variants for LINC02823 Gene

Sequence variations from dbSNP and Humsavar for LINC02823 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000126545 -- 91,338,077(+) G/T genic_upstream_transcript_variant, intron_variant
rs1000384589 -- 91,338,229(+) T/C genic_upstream_transcript_variant, intron_variant
rs1000690104 -- 91,344,660(+) G/A intron_variant
rs1000711621 -- 91,356,821(+) C/G intron_variant
rs1000742882 -- 91,357,184(+) T/A intron_variant

Additional Variant Information for LINC02823 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02823

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02823 Gene

Disorders for LINC02823 Gene

No disorders were found for LINC02823 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02823 Gene

Publications for LINC02823 Gene

No publications were found for LINC02823 Gene.

No data available for External Links for LINC02823 Gene

Products for LINC02823 Gene

Sources for LINC02823 Gene