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Aliases for LINC02821 Gene

Subcategory (RNA class) for LINC02821 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for LINC02821 Gene

  • Long Intergenic Non-Protein Coding RNA 2821 2 3
  • Novel Transcript 5
  • AC084032.1 5

External Ids for LINC02821 Gene

Summaries for LINC02821 Gene

GeneCards Summary for LINC02821 Gene

LINC02821 (Long Intergenic Non-Protein Coding RNA 2821) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC02821 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02821 Gene

Genomics for LINC02821 Gene

GeneHancer (GH) Regulatory Elements for LINC02821 Gene

Promoters and enhancers for LINC02821 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J070180 Promoter 1.1 EPDnew Ensembl 611.3 +0.1 68 0.4 HNF4A LINC02821 CNOT2 GC12P070207 ENSG00000257815
GH12J070241 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 7.9 +63.4 63354 4.2 ZNF652 CC2D1A ZFX SIX5 ZNF148 NKRF POLR2A MLLT1 CEBPG GTF2F1 CNOT2 ENSG00000257815 LINC01481 KCNMB4 FRS2 LINC02821 ENSG00000279530
GH12J070048 Enhancer 1.2 Ensembl ENCODE 7.9 -128.6 -128627 6.2 CC2D1A ELF3 CBFA2T2 CEBPG GTF2F1 BACH1 MAFK SP7 TRIM24 SP1 LINC01481 KCNMB4 ENSG00000257815 LINC02821 RAB3IP CNOT2 LOC100125409 ENSG00000257241
GH12J070196 Enhancer 0.7 Ensembl ENCODE 13.4 +16.5 16468 2.4 CEBPB POLR2A ZNF335 MAFK LINC02821 LINC01481 ENSG00000257815 GC12P070207
GH12J070190 Enhancer 0.4 Ensembl 13.5 +10.3 10271 1.2 JUND JUN FOS LINC02821 LINC01481 GC12P070207 ENSG00000257815
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02821 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02821 Gene

Genomic Locations for LINC02821 Gene
20,682 bases
Plus strand
21,667 bases
Plus strand

Genomic View for LINC02821 Gene

Genes around LINC02821 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02821 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02821 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02821 Gene

Proteins for LINC02821 Gene

Post-translational modifications for LINC02821 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02821 Gene

Domains & Families for LINC02821 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02821 Gene

Function for LINC02821 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02821 Gene

Localization for LINC02821 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02821 Gene

Pathways & Interactions for LINC02821 Gene

PathCards logo

SuperPathways for LINC02821 Gene

No Data Available

Interacting Proteins for LINC02821 Gene

Gene Ontology (GO) - Biological Process for LINC02821 Gene


No data available for Pathways by source and SIGNOR curated interactions for LINC02821 Gene

Drugs & Compounds for LINC02821 Gene

No Compound Related Data Available

Transcripts for LINC02821 Gene

mRNA/cDNA for LINC02821 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02821 Gene

No ASD Table

Relevant External Links for LINC02821 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for LINC02821 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02821 Gene

Orthologs for LINC02821 Gene

Evolution for LINC02821 Gene

Gene Tree for LINC02821 (if available)
Gene Tree for LINC02821 (if available)

No data available for Orthologs for LINC02821 Gene

Paralogs for LINC02821 Gene

No data available for Paralogs for LINC02821 Gene

Variants for LINC02821 Gene

Sequence variations from dbSNP and Humsavar for LINC02821 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000248045 -- 70,193,657(+) T/C intron_variant
rs1000277513 -- 70,183,953(+) C/T intron_variant
rs1000317161 -- 70,198,457(+) T/C intron_variant
rs1000347011 -- 70,191,297(+) C/A intron_variant
rs1000424427 -- 70,200,395(+) A/G non_coding_transcript_variant

Additional Variant Information for LINC02821 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02821 Gene

Disorders for LINC02821 Gene

No disorders were found for LINC02821 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02821 Gene

Publications for LINC02821 Gene

No publications were found for LINC02821 Gene.

No data available for External Links for LINC02821 Gene

Products for LINC02821 Gene

Sources for LINC02821 Gene

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