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Aliases for LINC02818 Gene
Subcategory (RNA class) for LINC02818 Gene
lncRNA
Number of RNA Genes sources:
3 / 17
Aliases for LINC02818 Gene
External Ids for LINC02818 Gene
- HGNC: 54349
- Entrez Gene: 107985229
- Ensembl: ENSG00000231966
Previous GeneCards Identifiers for LINC02818 Gene
- GC01M181062
- GC01U906078
- GC01M181303
Summaries for LINC02818 Gene
GeneCards Summary for LINC02818 Gene
LINC02818 (Long Intergenic Non-Protein Coding RNA 2818) is an RNA Gene, and is affiliated with the lncRNA class.
Additional gene information for LINC02818 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02818 Gene
Genomics for LINC02818 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for LINC02818 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH01J180640 | Enhancer | 0.8 | Ensembl | 4.1 | -807.0 | -807021 | 5.6 | RFX1 IKZF1 PKNOX1 MTA1 NR2C1 HDAC1 SOX6 TCF12 EP300 SCRT2 | LINC02818 XPR1 lnc-ACBD6-5 KIAA1614 | |
| GH01J180827 | Enhancer | 0.7 | Ensembl | 4.5 | -991.3 | -991321 | 1 | CEBPG ZNF629 CEBPA ATF7 SOX13 ZBTB44 CEBPB NR3C1 FOXA2 OSR2 | LINC02818 piR-56883-018 ENSG00000283575 KIAA1614 XPR1 | |
| GH01J180390 | Enhancer | 0.6 | Ensembl | 4.4 | -561.8 | -561821 | 13.2 | CEBPG CEBPB ZNF316 CTCF SPI1 KDM4B GABPA REST HLF ZNF121 | ACBD6 LHX4-AS1 ENSG00000272906 LINC02818 lnc-TOR1AIP2-7 RF00994-069 lnc-TOR1AIP2-8 LHX4 | |
| GH01J180790 | Enhancer | 0.5 | Ensembl | 4.4 | -956.1 | -956121 | 3.4 | SCRT2 BCOR SPI1 ZNF24 ZNF121 | LINC02818 ENSG00000283575 piR-56883-018 KIAA1614 XPR1 | |
| GH01J180773 | Enhancer | 0.4 | Ensembl | 4.2 | -937.4 | -937421 | 1.2 | PRDM1 FOSL2 JUND JUN | LINC02818 ENSG00000283575 piR-56883-018 KIAA1614 XPR1 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LINC02818 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for LINC02818 Gene
Genomic Locations for LINC02818 Gene
- chr1:179,820,139-179,836,180
- (GRCh38/hg38)
- Size:
- 16,042 bases
- Orientation:
- Minus strand
- chr1:179,798,744-179,805,259
- (GRCh37/hg19)
- Size:
- 6,516 bases
- Orientation:
- Minus strand
Genomic View for LINC02818 Gene
Genes around LINC02818 on UCSC Golden Path with GeneCards custom track
LINC02818 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
- Cytogenetic band:
-
- 1q25.2 by HGNC
- 1q25.2 by Entrez Gene
- 1q25.2 by Ensembl
LINC02818 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LINC02818 Gene
Proteins for LINC02818 Gene
Post-translational modifications for LINC02818 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC02818
- Origene Custom Protein Services for LINC02818
No data available for DME Specific Peptides for LINC02818 Gene
Domains & Families for LINC02818 Gene
Gene Families for LINC02818 Gene
No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02818 Gene
Function for LINC02818 Gene
Phenotypes From GWAS Catalog for LINC02818 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Browse CRISPR knockouts for LINC02818
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02818 Gene
Localization for LINC02818 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02818 Gene
Transcripts for LINC02818 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02818 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS00001BFFB2_9606 | lncRNA | 353 | 5 |
HGNC: 54349, Ensembl: ENST00000442108 (view in UCSC) , LncBook: HSALNT0018183, LNCipedia: lnc-TOR1AIP2-1:1, NONCODE: NONHSAT008215.2, |
| URS00009BA8E4_9606 | lncRNA | 352 | 2 |
LncBook: HSALNT0018184, NONCODE: NONHSAT152598.1, |
| URS00009C1EE0_9606 | lncRNA | 407 | 1 |
NONCODE: NONHSAT152599.1, |
LINC02818 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
CRISPR Products
- Browse CRISPR knockouts for LINC02818
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for LINC02818 Gene
- GeneLoc Exon Structure for
- LINC02818
No data available for mRNA/cDNA for LINC02818 Gene
Expression for LINC02818 Gene
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02818 Gene
Orthologs for LINC02818 Gene
No data available for Orthologs for LINC02818 Gene
Paralogs for LINC02818 Gene
No data available for Paralogs for LINC02818 Gene
Variants for LINC02818 Gene
Additional Variant Information for LINC02818 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- LINC02818
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02818 Gene
Disorders for LINC02818 Gene
Additional Disease Information for LINC02818
No disorders were found for LINC02818 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02818 Gene
Publications for LINC02818 Gene
No publications were found for LINC02818 Gene.
No data available for Mastermind for LINC02818 Gene
Products for LINC02818 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC02818
- Origene Custom Protein Services for LINC02818
- Browse OriGene Inhibitory RNA Products For LINC02818
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LINC02818
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LINC02818
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LINC02818
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LINC02818
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LINC02818
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LINC02818
Sources for LINC02818 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB