Aliases for LINC02818 Gene

Subcategory (RNA class) for LINC02818 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC02818 Gene

  • Long Intergenic Non-Protein Coding RNA 2818 2 3 5
  • LINC02818 2 5
  • NONHSAG003606.2 91
  • Lnc-TOR1AIP2-1 165
  • HSALNG0008777 164

External Ids for LINC02818 Gene

Previous GeneCards Identifiers for LINC02818 Gene

  • GC01M181062
  • GC01U906078
  • GC01M181303

Summaries for LINC02818 Gene

GeneCards Summary for LINC02818 Gene

LINC02818 (Long Intergenic Non-Protein Coding RNA 2818) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02818 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02818 Gene

Genomics for LINC02818 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02818 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J180640 Enhancer 0.8 Ensembl 4.1 -807.0 -807021 5.6 RFX1 IKZF1 PKNOX1 MTA1 NR2C1 HDAC1 SOX6 TCF12 EP300 SCRT2 LINC02818 XPR1 lnc-ACBD6-5 KIAA1614
GH01J180827 Enhancer 0.7 Ensembl 4.5 -991.3 -991321 1 CEBPG ZNF629 CEBPA ATF7 SOX13 ZBTB44 CEBPB NR3C1 FOXA2 OSR2 LINC02818 piR-56883-018 ENSG00000283575 KIAA1614 XPR1
GH01J180390 Enhancer 0.6 Ensembl 4.4 -561.8 -561821 13.2 CEBPG CEBPB ZNF316 CTCF SPI1 KDM4B GABPA REST HLF ZNF121 ACBD6 LHX4-AS1 ENSG00000272906 LINC02818 lnc-TOR1AIP2-7 RF00994-069 lnc-TOR1AIP2-8 LHX4
GH01J180790 Enhancer 0.5 Ensembl 4.4 -956.1 -956121 3.4 SCRT2 BCOR SPI1 ZNF24 ZNF121 LINC02818 ENSG00000283575 piR-56883-018 KIAA1614 XPR1
GH01J180773 Enhancer 0.4 Ensembl 4.2 -937.4 -937421 1.2 PRDM1 FOSL2 JUND JUN LINC02818 ENSG00000283575 piR-56883-018 KIAA1614 XPR1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02818 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02818 Gene

Genomic Locations for LINC02818 Gene
chr1:179,820,139-179,836,180
(GRCh38/hg38)
Size:
16,042 bases
Orientation:
Minus strand
chr1:179,798,744-179,805,259
(GRCh37/hg19)
Size:
6,516 bases
Orientation:
Minus strand

Genomic View for LINC02818 Gene

Genes around LINC02818 on UCSC Golden Path with GeneCards custom track
LINC02818 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC02818 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02818 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02818 Gene

Proteins for LINC02818 Gene

Post-translational modifications for LINC02818 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02818 Gene

Domains & Families for LINC02818 Gene

Gene Families for LINC02818 Gene

genes like me logo Genes that share domains with LINC02818: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02818 Gene

Function for LINC02818 Gene

Phenotypes From GWAS Catalog for LINC02818 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02818 Gene

Localization for LINC02818 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02818 Gene

Pathways & Interactions for LINC02818 Gene

PathCards logo

SuperPathways for LINC02818 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02818 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02818 Gene

Drugs & Compounds for LINC02818 Gene

No Compound Related Data Available

Transcripts for LINC02818 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02818 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00001BFFB2_9606 lncRNA 353 5

HGNC: 54349,

Ensembl: ENST00000442108 (view in UCSC) ,

LncBook: HSALNT0018183,

LNCipedia: lnc-TOR1AIP2-1:1,

NONCODE: NONHSAT008215.2,

URS00009BA8E4_9606 lncRNA 352 2

LncBook: HSALNT0018184,

NONCODE: NONHSAT152598.1,

URS00009C1EE0_9606 lncRNA 407 1

NONCODE: NONHSAT152599.1,

LINC02818 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02818 Gene

No ASD Table

Relevant External Links for LINC02818 Gene

GeneLoc Exon Structure for
LINC02818

No data available for mRNA/cDNA for LINC02818 Gene

Expression for LINC02818 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02818 Gene

Orthologs for LINC02818 Gene

Evolution for LINC02818 Gene

ENSEMBL:
Gene Tree for LINC02818 (if available)
TreeFam:
Gene Tree for LINC02818 (if available)

No data available for Orthologs for LINC02818 Gene

Paralogs for LINC02818 Gene

No data available for Paralogs for LINC02818 Gene

Variants for LINC02818 Gene

Additional dbSNP identifiers (rs#s) for LINC02818 Gene

Additional Variant Information for LINC02818 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02818

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02818 Gene

Disorders for LINC02818 Gene

Additional Disease Information for LINC02818

No disorders were found for LINC02818 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02818 Gene

Publications for LINC02818 Gene

No publications were found for LINC02818 Gene.

No data available for Mastermind for LINC02818 Gene

Products for LINC02818 Gene

Sources for LINC02818 Gene