Aliases for LINC02813 Gene
Subcategory (RNA class) for LINC02813 Gene
non-coding RNA
Quality Score for this RNA gene is
13
Aliases for LINC02813 Gene
External Ids for LINC02813 Gene
- HGNC: 54345
- Entrez Gene: 107985338
- Ensembl: ENSG00000225334
Summaries for LINC02813 Gene
GeneCards Summary for LINC02813 Gene
LINC02813 (Long Intergenic Non-Protein Coding RNA 2813) is an RNA Gene, and is affiliated with the non-coding RNA class.
Additional gene information for LINC02813 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02813 Gene
Genomics for LINC02813 Gene
GeneHancer (GH) Regulatory Elements for LINC02813 Gene
Promoters and enhancers for LINC02813 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH01J224766 | Enhancer | 0.2 | Ensembl | 606.3 | +0.7 | 749 | 1.4 | LINC02813 ENSG00000229400 GC01M224862 | ||
| GH01J224765 | Enhancer | 0.2 | Ensembl | 600.7 | -0.6 | -551 | 0.4 | LINC02813 ENSG00000229400 | ||
| GH01J224746 | Enhancer | 0.9 | Ensembl dbSUPER | 6.9 | -16.3 | -16251 | 11.4 | ZNF687 RELA ZNF174 ZNF548 MZF1 IKZF1 PKNOX1 PRDM10 IKZF2 ZIC2 | CICP5 NVL ENSG00000185495 WDR26 ENSG00000233384 CNIH3 LINC02813 ENSG00000229400 | |
| GH01J224789 | Enhancer | 0.5 | Ensembl | 11.3 | +25.4 | 25449 | 4 | ZNF121 PRDM1 MYC MAX BCL6B | LINC02813 ENSG00000229400 DNAH14 GC01M224862 | |
| GH01J224828 | Enhancer | 0.2 | Ensembl | 10.7 | +61.8 | 61849 | 0.4 | LINC02813 GC01M224862 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LINC02813 on UCSC Golden Path with GeneCards custom track
Genomic Locations for LINC02813 Gene
Genomic Locations for LINC02813 Gene
- chr1:224,766,352-224,773,341
- (GRCh38/hg38)
- Size:
- 6,990 bases
- Orientation:
- Plus strand
- chr1:224,954,602-224,961,043
- (GRCh37/hg19)
- Size:
- 6,442 bases
- Orientation:
- Plus strand
Genomic View for LINC02813 Gene
Genes around LINC02813 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 1q42.12 by HGNC
- 1q42.12 by Entrez Gene
- 1q42.12 by Ensembl
LINC02813 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LINC02813 Gene
Proteins for LINC02813 Gene
Post-translational modifications for LINC02813 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC02813
- Origene Custom Protein Services for LINC02813
No data available for DME Specific Peptides for LINC02813 Gene
Domains & Families for LINC02813 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02813 Gene
Function for LINC02813 Gene
Phenotypes From GWAS Catalog for LINC02813 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for LINC02813
-
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02813 Gene
Localization for LINC02813 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02813 Gene
Transcripts for LINC02813 Gene
mRNA/cDNA for LINC02813 Gene
- (2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000651912 1314 bps
- ENST00000416908 423 bps (ENST00000416908.1)
- (1) RNA Central transcripts :
CRISPR Products
- Browse CRISPR knockouts for LINC02813
miRNA Products
Inhibitory RNA Products
Clone Products
Expression for LINC02813 Gene
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02813 Gene
Orthologs for LINC02813 Gene
No data available for Orthologs for LINC02813 Gene
Paralogs for LINC02813 Gene
No data available for Paralogs for LINC02813 Gene
Variants for LINC02813 Gene
| SNP ID | Clin | Chr 01 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000138738 | -- | 224,764,617(+) | C/T | upstream_transcript_variant | |
| rs1000140879 | -- | 224,767,672(+) | C/T | intron_variant | |
| rs1000195084 | -- | 224,767,401(+) | C/T | intron_variant | |
| rs1000877098 | -- | 224,770,754(+) | G/A | intron_variant | |
| rs1001119155 | -- | 224,769,007(+) | C/T | intron_variant |
Additional Variant Information for LINC02813 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- LINC02813
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02813 Gene
Disorders for LINC02813 Gene
No disorders were found for LINC02813 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02813 Gene
Publications for LINC02813 Gene
No publications were found for LINC02813 Gene.
No data available for External Links for LINC02813 Gene
Products for LINC02813 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC02813
- Origene Custom Protein Services for LINC02813
- Browse OriGene Inhibitory RNA Products For LINC02813
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LINC02813
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LINC02813
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Cyagen custom Knockout/knockin (KOKI) mouse models for LINC02813
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LINC02813
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LINC02813
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LINC02813
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LINC02813
Sources for LINC02813 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) UniGene
- (28) AceView
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) HGMD
- (45) GAD
- (46) BGMUT
- (47) HuGE
- (48) Atlas
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) OCA
- (69) Proteopedia
- (70) MOPED
- (71) neXtProt
- (72) Reactome
- (73) GeneGo (Thomson Reuters)
- (74) fRNAdb
- (75) DISEASES
- (76) SIMAP
- (77) GenomeRNAi
- (78) LifeMap
- (79) miRTarBase
- (80) MalaCards
- (81) Invitrogen
- (82) BitterDB
- (83) ESI-BIO
- (84) RefSeq
- (85) BioSystems
- (86) MaxQB
- (87) IUPHAR
- (88) BioGPS
- (89) Illumina
- (90) COMPARTMENTS
- (91) HOMER
- (92) PaxDb
- (93) ApexBio
- (94) Addgene
- (95) antibodies-online
- (96) CYP
- (97) NONCODE
- (98) SwitchGear Genomics
- (99) TreeFam
- (100) PathCards
- (101) GeneReviews
- (102) GeneTex
- (103) Taconic Biosciences
- (104) GTEx
- (105) ProteomicsDB
- (106) SCBT
- (107) DGIdb
- (108) ClinicalTrials
- (109) FDA Approved Drugs
- (110) RVIS
- (111) SIGNOR
- (112) diseasecard
- (113) NIH Rare Diseases
- (114) Orphanet
- (115) UMLS
- (116) GTR
- (117) Disease Ontology
- (118) Genetics Home Reference
- (119) MeSH
- (120) MedlinePlus
- (121) CDC
- (122) NINDS
- (123) NCBI Bookshelf
- (124) ClinVar
- (125) Gene Damage Index
- (126) ViGene Biosciences
- (127) HPO
- (128) UDN
- (129) VISTA
- (130) FANTOM5
- (131) ENCODE
- (132) ProSci
- (133) Horizon
- (134) NURSA
- (135) IID
- (136) Cyagen
- (137) VectorBuilder
- (138) SNPedia
- (139) BRCA Exchange
- (140) St John's Lab
- (141) CIViC
- (142) ProteoGenix
- (143) dbSUPER
- (144) TISSUES
- (145) Gene ORGANizer
- (146) abm
- (147) CrownBio
- (148) Human Protein Atlas
- (149) GWAS Catalog
- (150) Monarch Initiative
- (151) DataMed
- (152) HumanCyc
- (153) genomics-online
- (154) UCNEbase
- (155) EPDnew
- (156) Applied Biosystems
- (157) GlyConnect
- (158) Aminode
- (159) GeneCopoeia
- (160) GPS-Prot
- (161) RNACentral
- (162) LncRNADisease
- (163) LOVD
- (164) miR2Disease
- (165) DiseaseEnhancer
- (166) Boster Bio
- (167) Biorbyt
- (168) Biocompare
- (169) Mastermind