Aliases for LINC02813 Gene

Data sources for LINC02813 Gene:

Subcategory (RNA class) for LINC02813 Gene

lncRNA

Aliases for LINC02813 Gene

External Ids for LINC02813 Gene

Previous GeneCards Identifiers for LINC02813 Gene

  • GC01U906076

Summaries for LINC02813 Gene

GeneCards Summary for LINC02813 Gene

LINC02813 (Long Intergenic Non-Protein Coding RNA 2813) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02813 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02813 Gene

Genomics for LINC02813 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02813 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J224762 Enhancer 0.3 Ensembl 250.7 -1.9 -1889 1 ATF4 LINC02813 CNIH3-AS1 LBR HSALNG0010974 ENSG00000286719 DNAH14 WDR26
GH01J224766 Enhancer 0.2 Ensembl 256.3 +1.9 1911 1.4 LINC02813 CNIH3-AS1 HSALNG0010977 ENSG00000286719 DNAH14 WDR26
GH01J224789 Enhancer 0.5 Ensembl 11.3 +26.2 26210 3.2 SPI1 MYC MAX BCL6B ZNF121 PRDM1 LINC02813 CNIH3-AS1 DNAH14 HSALNG0010977 piR-51855-003 ENSG00000286719 WDR26
GH01J224769 Enhancer 0.6 Ensembl 0.7 +4.9 4878 1.3 TEAD3 JUND FOSL1 PRDM6 ZBTB48 SP7 FOSL2 HLF ZNF629 ATF3 CNIH3-AS1 LINC02813 HSALNG0010977 ENSG00000286719 DNAH14 WDR26
GH01J224779 Enhancer 0.8 Ensembl 0.4 +17.4 17411 6.8 CEBPA FOXA2 ZNF639 TRIM22 RXRA EBF1 JUND ZBTB40 SPI1 BHLHE40 CNIH3-AS1 LINC02765 DNAH14 HSALNG0010977 LINC02813 ENSG00000286719 WDR26
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02813 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02813 Gene

Latest Assembly
chr1:224,765,190-224,779,355
(GRCh38/hg38)
Size:
14,166 bases
Orientation:
Plus strand

Previous Assembly
chr1:224,954,602-224,961,043
(GRCh37/hg19 by Ensembl)
Size:
6,442 bases
Orientation:
Plus strand

Genomic View for LINC02813 Gene

Genes around LINC02813 on UCSC Golden Path with GeneCards custom track
LINC02813 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC02813 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02813 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02813 Gene

Proteins for LINC02813 Gene

Post-translational modifications for LINC02813 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02813 Gene

Domains & Families for LINC02813 Gene

Gene Families for LINC02813 Gene

genes like me logo Genes that share domains with LINC02813: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02813 Gene

Function for LINC02813 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02813 Gene

Localization for LINC02813 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02813 Gene

Pathways & Interactions for LINC02813 Gene

PathCards logo

SuperPathways for LINC02813 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02813 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02813 Gene

Drugs & Compounds for LINC02813 Gene

No Compound Related Data Available

Transcripts for LINC02813 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02813 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00002B6E59_9606 lncRNA 425 2

Ensembl: ENST00000416908 (view in UCSC) ,

LNCipedia: lnc-CNIH3-1:2,

URS0000EEBA6D_9606 lncRNA 1355 1

Ensembl: ENST00000669302 (view in UCSC) ,

URS0000E8A6A9_9606 lncRNA 1314 1

Ensembl: ENST00000651912 (view in UCSC) ,

URS0000EF67FB_9606 lncRNA 1000 1

Ensembl: ENST00000662308 (view in UCSC) ,

URS0000EED44E_9606 lncRNA 993 1

Ensembl: ENST00000657658 (view in UCSC) ,

LINC02813 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02813 Gene

No ASD Table

Relevant External Links for LINC02813 Gene

GeneLoc Exon Structure for
LINC02813

No data available for mRNA/cDNA for LINC02813 Gene

Expression for LINC02813 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02813 Gene

Orthologs for LINC02813 Gene

Evolution for LINC02813 Gene

ENSEMBL:
Gene Tree for LINC02813 (if available)
TreeFam:
Gene Tree for LINC02813 (if available)

No data available for Orthologs for LINC02813 Gene

Paralogs for LINC02813 Gene

No data available for Paralogs for LINC02813 Gene

Variants for LINC02813 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC02813 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LINC02813 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02813

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02813 Gene

Disorders for LINC02813 Gene

No disorders were found for LINC02813 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02813 Gene

Publications for LINC02813 Gene

No publications were found for LINC02813 Gene.

No data available for Mastermind for LINC02813 Gene

Products for LINC02813 Gene

Sources for LINC02813 Gene