Aliases for LINC02812 Gene

Data sources for LINC02812 Gene:

RNA type for LINC02812 Gene

lncRNA

Aliases for LINC02812 Gene

External Ids for LINC02812 Gene

Previous GeneCards Identifiers for LINC02812 Gene

  • GC01U906075

Summaries for LINC02812 Gene

GeneCards Summary for LINC02812 Gene

LINC02812 (Long Intergenic Non-Protein Coding RNA 2812) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02812 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02812 Gene

Genomics for LINC02812 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02812 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J053367 Promoter/Enhancer 1.2 Ensembl ENCODE 250.7 +0.1 107 1.7 ZNF207 NCOR1 MYC POLR2A ZIC2 HES1 ZNF341 TAL1 SMARCA5 SKIL HSALNG0003698 LINC02812 LRP8 LINC01771 ENSG00000232762 RNU7-95P DMRTB1
GH01J053375 Enhancer 0.7 Ensembl CraniofacialAtlas 0.4 -8.0 -8002 2.1 ZIC2 SMAD4 GABPB1 ZNF205 GLIS1 NFIA MLX CTCF GLIS2 LINC01771 LRP8 LINC02812 lnc-LRP8-5 DMRTB1
GH01J053381 Enhancer 0.7 Ensembl ENCODE 0.4 -13.7 -13738 1.4 MCM7 JUND ZNF629 ZNF660 ZBTB17 HMBOX1 ZNF184 LINC01771 LRP8 ENSG00000232762 lnc-LRP8-5 LINC02812 DMRTB1
GH01J053380 Enhancer 0.4 Ensembl 0.4 -12.0 -12038 0.8 ZNF366 MLLT1 ZNF23 LINC01771 LRP8 ENSG00000232762 lnc-LRP8-5 LINC02812 DMRTB1
GH01J053370 Enhancer 0.2 Ensembl 0.7 -2.2 -2238 0.4 LRP8 LINC01771 LINC02812 lnc-LRP8-5 DMRTB1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02812 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02812 Gene

Latest Assembly
chr1:53,363,868-53,368,363
(GRCh38/hg38)
Size:
4,496 bases
Orientation:
Minus strand

Previous Assembly
chr1:53,832,340-53,833,917
(GRCh37/hg19 by Ensembl)
Size:
1,578 bases
Orientation:
Minus strand

Genomic View for LINC02812 Gene

Genes around LINC02812 on UCSC Golden Path with GeneCards custom track
LINC02812 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC02812 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02812 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02812 Gene

Proteins for LINC02812 Gene

Post-translational modifications for LINC02812 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02812 Gene

Domains & Families for LINC02812 Gene

Gene Families for LINC02812 Gene

genes like me logo Genes that share domains with LINC02812: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02812 Gene

Function for LINC02812 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02812 Gene

Localization for LINC02812 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02812 Gene

Pathways & Interactions for LINC02812 Gene

PathCards logo

SuperPathways for LINC02812 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02812 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02812 Gene

Drugs & Compounds for LINC02812 Gene

No Compound Related Data Available

Transcripts for LINC02812 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02812 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS000007B231_9606 lncRNA 850 3

Ensembl: ENST00000449958 (view in UCSC) ,

LNCipedia: lnc-LRP8-3:1,

NONCODE: NONHSAT003320.2,

URS0000EF2C63_9606 lncRNA 811 1

Ensembl: ENST00000669809 (view in UCSC) ,

URS00009B331F_9606 lncRNA 837 2

LncBook: HSALNT0006939,

NONCODE: NONHSAT151613.1,

URS0001BCEB97_9606 lncRNA 1175 1

LncBook: HSALNT0006938,

LINC02812 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02812 Gene

No ASD Table

Relevant External Links for LINC02812 Gene

GeneLoc Exon Structure for
LINC02812

No data available for mRNA/cDNA for LINC02812 Gene

Expression for LINC02812 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02812 Gene

Orthologs for LINC02812 Gene

Evolution for LINC02812 Gene

ENSEMBL:
Gene Tree for LINC02812 (if available)
TreeFam:
Gene Tree for LINC02812 (if available)
Alliance of Genome Resources:
Additional Orthologs for LINC02812

No data available for Orthologs for LINC02812 Gene

Paralogs for LINC02812 Gene

No data available for Paralogs for LINC02812 Gene

Variants for LINC02812 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC02812 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LINC02812 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02812
Leiden Open Variation Database (LOVD)
LINC02812

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02812 Gene

Disorders for LINC02812 Gene

Additional Disease Information for LINC02812

Open Targets Platform
Open Targets Platform

No disorders were found for LINC02812 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02812 Gene

Publications for LINC02812 Gene

No publications were found for LINC02812 Gene.

No data available for Mastermind for LINC02812 Gene

Products for LINC02812 Gene

Sources for LINC02812 Gene