Aliases for LINC02811 Gene

Subcategory (RNA class) for LINC02811 Gene

lncRNA

Number of RNA Genes sources:

1 / 17

Aliases for LINC02811 Gene

  • Long Intergenic Non-Protein Coding RNA 2811 2 3 5
  • LINC02811 2 5
  • Lnc-BMP8B-1 165

External Ids for LINC02811 Gene

Previous GeneCards Identifiers for LINC02811 Gene

  • GC01U906074

Summaries for LINC02811 Gene

GeneCards Summary for LINC02811 Gene

LINC02811 (Long Intergenic Non-Protein Coding RNA 2811) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02811 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02811 Gene

Genomics for LINC02811 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02811 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J039816 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 600.7 +0.4 398 1.9 SP1 CREB1 CTCF ATF7 PRDM10 ZNF629 IKZF1 ZNF692 BACH1 JUND LINC02811 TRIT1 OXCT2 PPIE MACF1 TMCO2 RLF MFSD2A PABPC4 lnc-PPIE-9
GH01J039818 Enhancer 0.4 ENCODE dbSUPER 600.7 -1.0 -1009 0.2 FOS LINC02811 lnc-PPIE-10 BMP8B TRIT1
GH01J039805 Enhancer 0.5 Ensembl 0.4 +11.9 11874 0.4 IKZF1 PRDM1 ZNF341 ZNF189 ZNF610 ZNF18 ZFP37 ZNF280C ZNF121 TRIT1 PPIE OXCT2 PPIEL MYCL ENSG00000202222 CAP1 BMP8B piR-43099-027 ENSG00000284719
GH01J039820 Enhancer 0.2 dbSUPER 0.7 -2.7 -2654 0.5 lnc-PPIE-10 TRIT1 OXCT2 LINC02811 BMP8B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02811 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02811 Gene

Genomic Locations for LINC02811 Gene
chr1:39,801,414-39,817,675
(GRCh38/hg38)
Size:
16,262 bases
Orientation:
Minus strand

Genomic View for LINC02811 Gene

Genes around LINC02811 on UCSC Golden Path with GeneCards custom track
LINC02811 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC02811 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02811 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02811 Gene

Proteins for LINC02811 Gene

Post-translational modifications for LINC02811 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02811 Gene

Domains & Families for LINC02811 Gene

Gene Families for LINC02811 Gene

genes like me logo Genes that share domains with LINC02811: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02811 Gene

Function for LINC02811 Gene

Phenotypes From GWAS Catalog for LINC02811 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02811 Gene

Localization for LINC02811 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02811 Gene

Pathways & Interactions for LINC02811 Gene

PathCards logo

SuperPathways for LINC02811 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02811 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02811 Gene

Drugs & Compounds for LINC02811 Gene

No Compound Related Data Available

Transcripts for LINC02811 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02811 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000BCCD9B_9606 lncRNA 673 3

HGNC: 54343,

Ensembl: ENST00000641026 (view in UCSC) ,

LNCipedia: lnc-BMP8B-1:1,

LINC02811 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02811 Gene

No ASD Table

Relevant External Links for LINC02811 Gene

GeneLoc Exon Structure for
LINC02811

No data available for mRNA/cDNA for LINC02811 Gene

Expression for LINC02811 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02811 Gene

Orthologs for LINC02811 Gene

Evolution for LINC02811 Gene

ENSEMBL:
Gene Tree for LINC02811 (if available)
TreeFam:
Gene Tree for LINC02811 (if available)

No data available for Orthologs for LINC02811 Gene

Paralogs for LINC02811 Gene

No data available for Paralogs for LINC02811 Gene

Variants for LINC02811 Gene

Additional dbSNP identifiers (rs#s) for LINC02811 Gene

Additional Variant Information for LINC02811 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02811

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02811 Gene

Disorders for LINC02811 Gene

No disorders were found for LINC02811 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02811 Gene

Publications for LINC02811 Gene

No publications were found for LINC02811 Gene.

No data available for Mastermind for LINC02811 Gene

Products for LINC02811 Gene

Sources for LINC02811 Gene