Aliases for LINC02810 Gene

Subcategory (RNA class) for LINC02810 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC02810 Gene

  • Long Intergenic Non-Protein Coding RNA 2810 2 3 5
  • LINC02810 2 5
  • NONHSAG000519.2 91
  • HSALNG0001288 164
  • Lnc-ACTL8-1 165

External Ids for LINC02810 Gene

Previous GeneCards Identifiers for LINC02810 Gene

  • GC01P017718

Summaries for LINC02810 Gene

GeneCards Summary for LINC02810 Gene

LINC02810 (Long Intergenic Non-Protein Coding RNA 2810) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02810 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02810 Gene

Genomics for LINC02810 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02810 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J017716 Enhancer 0.5 FANTOM5 dbSUPER 600.7 -1.1 -1062 0.2 ZNF341 ZNF366 LINC02810 RCC2 piR-35672-002 ACTL8 ARHGEF10L
GH01J017682 Enhancer 0.6 Ensembl dbSUPER 0.3 -34.0 -33972 4 ZIC2 RBM22 ZNF623 ZBTB40 piR-35672-002 LINC02810 ACTL8 ARHGEF10L
GH01J017724 Enhancer 0.4 dbSUPER 0.4 +8.1 8110 1.7 GLIS1 JUND ZNF133 ACTL8 piR-43105-019 LINC02810 ARHGEF10L
GH01J017699 Enhancer 0.4 Ensembl dbSUPER 0.4 -16.1 -16073 1 ZIC2 LINC02810 piR-35672-002 ACTL8 ARHGEF10L
GH01J017696 Enhancer 0.5 Ensembl 0.4 -21.0 -20972 0.8 CTCF TEAD4 IKZF1 RAD21 RBM22 ZNF189 SMC3 piR-35672-002 LINC02810 ACTL8 ARHGEF10L
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02810 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02810 Gene

Genomic Locations for LINC02810 Gene
chr1:17,717,573-17,749,979
(GRCh38/hg38)
Size:
32,407 bases
Orientation:
Plus strand
chr1:18,044,182-18,076,473
(GRCh37/hg19)
Size:
32,292 bases
Orientation:
Plus strand

Genomic View for LINC02810 Gene

Genes around LINC02810 on UCSC Golden Path with GeneCards custom track
LINC02810 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC02810 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02810 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02810 Gene

Proteins for LINC02810 Gene

Post-translational modifications for LINC02810 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02810 Gene

Domains & Families for LINC02810 Gene

Gene Families for LINC02810 Gene

genes like me logo Genes that share domains with LINC02810: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02810 Gene

Function for LINC02810 Gene

Phenotypes From GWAS Catalog for LINC02810 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02810 Gene

Localization for LINC02810 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02810 Gene

Pathways & Interactions for LINC02810 Gene

PathCards logo

SuperPathways for LINC02810 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02810 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02810 Gene

Drugs & Compounds for LINC02810 Gene

No Compound Related Data Available

Transcripts for LINC02810 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02810 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00005529BB_9606 lncRNA 610 4

Ensembl: ENST00000430540 (view in UCSC) ,

LncBook: HSALNT0002436,

LNCipedia: lnc-ACTL8-1:1,

NONCODE: NONHSAT001252.2,

URS0000EF17A3_9606 lncRNA 1025 2

HGNC: 54342,

Ensembl: ENST00000669051 (view in UCSC) ,

URS0000EF0771_9606 lncRNA 943 1

Ensembl: ENST00000670395 (view in UCSC) ,

URS0000EED61F_9606 lncRNA 700 1

Ensembl: ENST00000653706 (view in UCSC) ,

URS00008B2D04_9606 lncRNA 846 3

LncBook: HSALNT0002438,

LNCipedia: lnc-ACTL8-1:2,

NONCODE: NONHSAT001253.2,

LINC02810 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02810 Gene

No ASD Table

Relevant External Links for LINC02810 Gene

GeneLoc Exon Structure for
LINC02810

No data available for mRNA/cDNA for LINC02810 Gene

Expression for LINC02810 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02810 Gene

Orthologs for LINC02810 Gene

Evolution for LINC02810 Gene

ENSEMBL:
Gene Tree for LINC02810 (if available)
TreeFam:
Gene Tree for LINC02810 (if available)

No data available for Orthologs for LINC02810 Gene

Paralogs for LINC02810 Gene

No data available for Paralogs for LINC02810 Gene

Variants for LINC02810 Gene

Additional dbSNP identifiers (rs#s) for LINC02810 Gene

Additional Variant Information for LINC02810 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02810

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02810 Gene

Disorders for LINC02810 Gene

Additional Disease Information for LINC02810

No disorders were found for LINC02810 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02810 Gene

Publications for LINC02810 Gene

No publications were found for LINC02810 Gene.

No data available for Mastermind for LINC02810 Gene

Products for LINC02810 Gene

Sources for LINC02810 Gene