Aliases for LINC02805 Gene

Subcategory (RNA class) for LINC02805 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC02805 Gene

  • Long Intergenic Non-Protein Coding RNA 2805 2 3 5
  • LINC02805 2 5
  • XXyac-YX155B6.5 3
  • NONHSAG002752.2 91
  • NONHSAG002751.2 91
  • HSALNG0006852 164
  • HSALNG0006851 164
  • Lnc-GPR89B-3 165
  • Lnc-GPR89B-2 165

External Ids for LINC02805 Gene

Summaries for LINC02805 Gene

GeneCards Summary for LINC02805 Gene

LINC02805 (Long Intergenic Non-Protein Coding RNA 2805) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02805 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02805 Gene

Genomics for LINC02805 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02805 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J148153 Promoter 0.3 Ensembl 600.7 -1.7 -1738 2 LINC02805 piR-56014-002 LOC105371227 NBPF11 PPIAL4G
GH01J148168 Enhancer 0.2 Ensembl 0.4 +12.5 12461 0.8 LINC02805 NBPF11 RF00001-014 ENSG00000227733 PPIAL4G
GH01J148166 Enhancer 0.2 Ensembl 0.4 +11.1 11062 1.6 LINC02805 NBPF11 RF00001-014 ENSG00000227733 PPIAL4G
GH01J148189 Enhancer 0.2 Ensembl 0.3 +33.2 33161 0.6 RF00001-014 LINC02805 NBPF11 ENSG00000227733 PPIAL4G
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02805 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02805 Gene

Genomic Locations for LINC02805 Gene
chr1:148,156,139-148,186,980
(GRCh38/hg38)
Size:
30,842 bases
Orientation:
Plus strand
chr1:147,634,989-147,658,907
(GRCh37/hg19)
Size:
23,919 bases
Orientation:
Plus strand

Genomic View for LINC02805 Gene

Genes around LINC02805 on UCSC Golden Path with GeneCards custom track
LINC02805 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC02805 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02805 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02805 Gene

Proteins for LINC02805 Gene

Post-translational modifications for LINC02805 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02805 Gene

Domains & Families for LINC02805 Gene

Gene Families for LINC02805 Gene

genes like me logo Genes that share domains with LINC02805: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02805 Gene

Function for LINC02805 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02805 Gene

Localization for LINC02805 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02805 Gene

Pathways & Interactions for LINC02805 Gene

PathCards logo

SuperPathways for LINC02805 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02805 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02805 Gene

Drugs & Compounds for LINC02805 Gene

No Compound Related Data Available

Transcripts for LINC02805 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02805 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000020FD86_9606 lncRNA 795 4

Ensembl: ENST00000595668 (view in UCSC) ,

LncBook: HSALNT0014503,

LNCipedia: lnc-GPR89B-3:8,

NONCODE: NONHSAT006071.2,

URS000020EC14_9606 lncRNA 657 4

Ensembl: ENST00000618809 (view in UCSC) ,

LncBook: HSALNT0014506,

LNCipedia: lnc-GPR89B-3:3,

NONCODE: NONHSAT006066.2,

URS000008187F_9606 lncRNA 590 4

Ensembl: ENST00000432038 (view in UCSC) ,

LncBook: HSALNT0014492,

LNCipedia: lnc-GPR89B-3:1,

NONCODE: NONHSAT006064.2,

URS00004FE442_9606 lncRNA 555 4

Ensembl: ENST00000594699 (view in UCSC) ,

LncBook: HSALNT0014501,

LNCipedia: lnc-GPR89B-3:9,

NONCODE: NONHSAT006072.2,

URS000022627D_9606 lncRNA 452 4

Ensembl: ENST00000411978 (view in UCSC) ,

LncBook: HSALNT0014494,

LNCipedia: lnc-GPR89B-3:2,

NONCODE: NONHSAT006065.2,

LINC02805 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC02805 Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02805 Gene

No ASD Table

Relevant External Links for LINC02805 Gene

GeneLoc Exon Structure for
LINC02805

Expression for LINC02805 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02805 Gene

Orthologs for LINC02805 Gene

Evolution for LINC02805 Gene

ENSEMBL:
Gene Tree for LINC02805 (if available)
TreeFam:
Gene Tree for LINC02805 (if available)

No data available for Orthologs for LINC02805 Gene

Paralogs for LINC02805 Gene

No data available for Paralogs for LINC02805 Gene

Variants for LINC02805 Gene

Additional dbSNP identifiers (rs#s) for LINC02805 Gene

Additional Variant Information for LINC02805 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02805

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02805 Gene

Disorders for LINC02805 Gene

Additional Disease Information for LINC02805

No disorders were found for LINC02805 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02805 Gene

Publications for LINC02805 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

No data available for Mastermind for LINC02805 Gene

Products for LINC02805 Gene

Sources for LINC02805 Gene