Aliases for LINC02791 Gene

Subcategory (RNA class) for LINC02791 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC02791 Gene

  • Long Intergenic Non-Protein Coding RNA 2791 2 3 5
  • LINC02791 2 5
  • NONHSAG001781.2 91
  • HSALNG0004346 164
  • Lnc-DEPDC1-2 165

External Ids for LINC02791 Gene

Summaries for LINC02791 Gene

GeneCards Summary for LINC02791 Gene

LINC02791 (Long Intergenic Non-Protein Coding RNA 2791) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02791 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02791 Gene

Genomics for LINC02791 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02791 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J069264 Enhancer 0.8 Ensembl 0.4 -14.9 -14883 0.8 PRDM10 ZNF629 POLR2A ZBTB44 ZBTB10 TSHZ1 OSR2 ZNF580 ZBTB17 ATF2 L13714-018 LINC02791 LRRC7 DEPDC1
GH01J069246 Enhancer 0.3 Ensembl 0.7 +2.9 2916 0.4 RFX1 RAD21 LINC02791 L13714-017 LRRC7 DEPDC1
GH01J069221 Enhancer 0.3 Ensembl 0.3 +27.8 27816 0.2 CTCF NFIC L13714-017 LOC105378787 LINC02791 LINC01707 LRRC7 DEPDC1
GH01J069244 Enhancer 0.2 Ensembl 0.4 +5.4 5416 0.2 LINC02791 L13714-017 LRRC7 DEPDC1
GH01J069243 Enhancer 0.2 Ensembl 0.4 +5.8 5816 0.2 LINC02791 L13714-017 LRRC7 DEPDC1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02791 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02791 Gene

Genomic Locations for LINC02791 Gene
chr1:69,215,481-69,249,517
(GRCh38/hg38)
Size:
34,037 bases
Orientation:
Minus strand
chr1:69,709,055-69,715,106
(GRCh37/hg19)
Size:
6,052 bases
Orientation:
Minus strand

Genomic View for LINC02791 Gene

Genes around LINC02791 on UCSC Golden Path with GeneCards custom track
LINC02791 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC02791 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02791 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02791 Gene

Proteins for LINC02791 Gene

Post-translational modifications for LINC02791 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02791 Gene

Domains & Families for LINC02791 Gene

Gene Families for LINC02791 Gene

genes like me logo Genes that share domains with LINC02791: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02791 Gene

Function for LINC02791 Gene

Phenotypes From GWAS Catalog for LINC02791 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02791 Gene

Localization for LINC02791 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02791 Gene

Pathways & Interactions for LINC02791 Gene

PathCards logo

SuperPathways for LINC02791 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02791 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02791 Gene

Drugs & Compounds for LINC02791 Gene

No Compound Related Data Available

Transcripts for LINC02791 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02791 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00003E98EE_9606 lncRNA 434 4

Ensembl: ENST00000439878 (view in UCSC) ,

LncBook: HSALNT0008611,

LNCipedia: lnc-DEPDC1-2:1,

NONCODE: NONHSAT003834.2,

URS0000DB8065_9606 lncRNA 792 2

HGNC: 54315,

Ensembl: ENST00000650525 (view in UCSC) ,

URS00009B8495_9606 lncRNA 434 2

LncBook: HSALNT0008612,

NONCODE: NONHSAT151760.1,

LINC02791 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02791 Gene

No ASD Table

Relevant External Links for LINC02791 Gene

GeneLoc Exon Structure for
LINC02791

No data available for mRNA/cDNA for LINC02791 Gene

Expression for LINC02791 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC02791

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02791 Gene

Orthologs for LINC02791 Gene

Evolution for LINC02791 Gene

ENSEMBL:
Gene Tree for LINC02791 (if available)
TreeFam:
Gene Tree for LINC02791 (if available)

No data available for Orthologs for LINC02791 Gene

Paralogs for LINC02791 Gene

No data available for Paralogs for LINC02791 Gene

Variants for LINC02791 Gene

Additional dbSNP identifiers (rs#s) for LINC02791 Gene

Additional Variant Information for LINC02791 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02791

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02791 Gene

Disorders for LINC02791 Gene

No disorders were found for LINC02791 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02791 Gene

Publications for LINC02791 Gene

No publications were found for LINC02791 Gene.

No data available for Mastermind for LINC02791 Gene

Products for LINC02791 Gene

Sources for LINC02791 Gene