Aliases for LINC02777 Gene

Subcategory (RNA class) for LINC02777 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC02777 Gene

  • Long Intergenic Non-Protein Coding RNA 2777 2 3 5
  • HSALNG0003961 167
  • NONHSAG001627 92
  • Lnc-JUN-2 168
  • LINC02777 2

External Ids for LINC02777 Gene

Summaries for LINC02777 Gene

GeneCards Summary for LINC02777 Gene

LINC02777 (Long Intergenic Non-Protein Coding RNA 2777) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02777 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02777 Gene

Genomics for LINC02777 Gene

GeneHancer (GH) Regulatory Elements for LINC02777 Gene

Promoters and enhancers for LINC02777 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J059025 Enhancer 1.1 Ensembl ENCODE dbSUPER 500.7 +2.0 1985 6.2 EP300 JUND FOS TRIM28 HES1 POLR2A CEBPG FOSL2 ARNT CEBPB LINC02777 JUN LINC01135 PHBP3 LINC01358
GH01J058894 Promoter/Enhancer 2.4 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 5.2 +129.7 129652 10.5 FOXK2 NRF1 POLR2G NCOR1 GTF2E2 PHF8 PHB2 ZFX ZIC2 REST LINC01135 JUN FGGY LINC02777 piR-35650 LINC01358 lnc-JUN-12
GH01J058880 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 5.4 +145.5 145524 7 EP300 FOXK2 ZSCAN5C TCF12 NRF1 NCOR1 GTF2E2 JUND FOS PHB2 LINC01135 FGGY JUN LINC02777 RF00994-017 piR-35650
GH01J058925 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 4.5 +99.8 99801 8.6 ZNF217 CTCF TCF12 FOS ZIC2 POLR2A ZNF423 KLF4 CTBP1 EP300 LINC01135 JUN FGGY LINC02777 TACSTD2 LINC01358 piR-35650 lnc-JUN-12
GH01J059696 Enhancer 1.2 ENCODE CraniofacialAtlas dbSUPER 5.4 -668.0 -668034 2.8 CTCF NCOR1 TCF7 SKI TEAD1 SMC3 CEBPB GATA3 CEBPG SAP130 JUN LINC01135 FGGY LINC02777 piR-32023-005 piR-33432-013
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02777 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02777 Gene

Genomic Locations for LINC02777 Gene
chr1:58,882,244-59,029,886
(GRCh38/hg38)
Size:
147,643 bases
Orientation:
Minus strand
chr1:59,348,540-59,362,375
(GRCh37/hg19)
Size:
13,836 bases
Orientation:
Minus strand

Genomic View for LINC02777 Gene

Genes around LINC02777 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02777 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02777 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02777 Gene

Proteins for LINC02777 Gene

Post-translational modifications for LINC02777 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02777 Gene

Domains & Families for LINC02777 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02777 Gene

Function for LINC02777 Gene

Phenotypes From GWAS Catalog for LINC02777 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02777 Gene

Localization for LINC02777 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02777 Gene

Pathways & Interactions for LINC02777 Gene

PathCards logo

SuperPathways for LINC02777 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC02777 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02777 Gene

Drugs & Compounds for LINC02777 Gene

No Compound Related Data Available

Transcripts for LINC02777 Gene

mRNA/cDNA for LINC02777 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02777 Gene

No ASD Table

Relevant External Links for LINC02777 Gene

GeneLoc Exon Structure for
LINC02777

Expression for LINC02777 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02777 Gene

Orthologs for LINC02777 Gene

Evolution for LINC02777 Gene

ENSEMBL:
Gene Tree for LINC02777 (if available)
TreeFam:
Gene Tree for LINC02777 (if available)

No data available for Orthologs for LINC02777 Gene

Paralogs for LINC02777 Gene

No data available for Paralogs for LINC02777 Gene

Variants for LINC02777 Gene

Additional dbSNP identifiers (rs#s) for LINC02777 Gene

Additional Variant Information for LINC02777 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02777

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02777 Gene

Disorders for LINC02777 Gene

No disorders were found for LINC02777 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02777 Gene

Publications for LINC02777 Gene

No publications were found for LINC02777 Gene.

No data available for Mastermind for LINC02777 Gene

Products for LINC02777 Gene

Sources for LINC02777 Gene