Aliases for LINC02775 Gene

Subcategory (RNA class) for LINC02775 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for LINC02775 Gene

  • Long Intergenic Non-Protein Coding RNA 2775 2 3 5
  • LINC02775 2 5
  • Lnc-PTPN14-11 165
  • HSALNG0010471 164

External Ids for LINC02775 Gene

Previous GeneCards Identifiers for LINC02775 Gene

  • GC01M214020

Summaries for LINC02775 Gene

GeneCards Summary for LINC02775 Gene

LINC02775 (Long Intergenic Non-Protein Coding RNA 2775) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02775 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02775 Gene

Genomics for LINC02775 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02775 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J214187 Promoter 1.1 Ensembl CraniofacialAtlas 600.7 +0.4 444 0.9 HNRNPL POLR2A EZH2 ZBTB26 ZBTB17 CBX2 ZNF335 ZFP36 CBX8 L3MBTL2 LINC02775 piR-57134-012 SMYD2 PROX1
GH01J214186 Enhancer 0.6 UCNEbase 600.7 +1.4 1414 0.4 PRDM6 EZH2 PKNOX1 LINC02775 piR-57134-012 SMYD2 PROX1
GH01J214123 Enhancer 1 Ensembl ENCODE 0.2 +63.4 63399 3.1 GATAD2A CTCF ZNF692 FOXA1 PRDM1 RXRB REST RAD21 IRF2 SP1 PROX1 HSALNG0010471 piR-30876-009 LINC02775 SMYD2
GH01J214192 Enhancer 0.4 Ensembl 0.4 -5.6 -5627 1.2 POLR2A RCOR1 SMARCA4 GATA2 SMYD2 LINC02775 piR-31115-001 PROX1
GH01J214107 Enhancer 0.8 VISTA ENCODE 0.2 +79.8 79839 1.6 SOX13 TEAD1 RAD21 TEAD3 SOX5 ZNF384 ZNF644 HSALNG0010471 piR-32470-006 LINC02775 PROX1 SMYD2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02775 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02775 Gene

Genomic Locations for LINC02775 Gene
chr1:214,051,194-214,187,773
(GRCh38/hg38)
Size:
136,580 bases
Orientation:
Minus strand

Genomic View for LINC02775 Gene

Genes around LINC02775 on UCSC Golden Path with GeneCards custom track
LINC02775 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC02775 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02775 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02775 Gene

Proteins for LINC02775 Gene

Post-translational modifications for LINC02775 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02775 Gene

Domains & Families for LINC02775 Gene

Gene Families for LINC02775 Gene

genes like me logo Genes that share domains with LINC02775: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02775 Gene

Function for LINC02775 Gene

Phenotypes From GWAS Catalog for LINC02775 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02775 Gene

Localization for LINC02775 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02775 Gene

Pathways & Interactions for LINC02775 Gene

PathCards logo

SuperPathways for LINC02775 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02775 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02775 Gene

Drugs & Compounds for LINC02775 Gene

No Compound Related Data Available

Transcripts for LINC02775 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02775 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000AB0D11_9606 lncRNA 2074 4

HGNC: 54294,

Ensembl: ENST00000637598 (view in UCSC) ,

LncBook: HSALNT0021745,

LNCipedia: lnc-PTPN14-11:1,

LINC02775 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02775 Gene

No ASD Table

Relevant External Links for LINC02775 Gene

GeneLoc Exon Structure for
LINC02775

No data available for mRNA/cDNA for LINC02775 Gene

Expression for LINC02775 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02775 Gene

Orthologs for LINC02775 Gene

Evolution for LINC02775 Gene

ENSEMBL:
Gene Tree for LINC02775 (if available)
TreeFam:
Gene Tree for LINC02775 (if available)

No data available for Orthologs for LINC02775 Gene

Paralogs for LINC02775 Gene

No data available for Paralogs for LINC02775 Gene

Variants for LINC02775 Gene

Additional dbSNP identifiers (rs#s) for LINC02775 Gene

Additional Variant Information for LINC02775 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02775

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02775 Gene

Disorders for LINC02775 Gene

No disorders were found for LINC02775 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02775 Gene

Publications for LINC02775 Gene

No publications were found for LINC02775 Gene.

No data available for Mastermind for LINC02775 Gene

Products for LINC02775 Gene

Sources for LINC02775 Gene