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Aliases for LINC02766 Gene

Subcategory (RNA class) for LINC02766 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for LINC02766 Gene

  • Long Intergenic Non-Protein Coding RNA 2766 2 3
  • Novel Transcript 5
  • AC243836.1 5

External Ids for LINC02766 Gene

Summaries for LINC02766 Gene

GeneCards Summary for LINC02766 Gene

LINC02766 (Long Intergenic Non-Protein Coding RNA 2766) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC02766 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02766 Gene

Genomics for LINC02766 Gene

GeneHancer (GH) Regulatory Elements for LINC02766 Gene

Promoters and enhancers for LINC02766 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J012525 Enhancer 1.5 Ensembl ENCODE dbSUPER 0.7 +2.5 2521 6.8 ZNF652 ZFX CC2D1A ELF3 ZKSCAN8 CBFA2T2 ZNF121 CEBPG RERE GTF2F1 RNU6ATAC18P GC01P012533 LINC02766
GH01J012518 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -6.1 -6079 1.2 IKZF1 GLIS2 PRDM10 ZIC2 SCRT2 ZXDB OSR2 SCRT1 NR2F1 ZFHX2 RNU6ATAC18P LINC02766 SNORA59A
GH01J012509 Enhancer 1.1 ENCODE dbSUPER 0.4 -14.2 -14239 2.6 ZKSCAN8 MLLT1 GTF2F1 CDC5L BACH1 TRIM24 SP1 EGR1 ZNF639 SMARCA4 SNORA59A LINC02766 VPS13D
GH01J012531 Enhancer 0.6 Ensembl 0.4 +6.5 6480 0.9 CC2D1A MLLT1 HDGF ZBTB5 ZNF592 ADNP HLTF RXRA ZBTB33 HDAC1 GC01P012533 LINC02766
GH01J012520 Enhancer 0.4 dbSUPER 0.7 -4.0 -4029 0.9 ZNF316 RCOR1 RNU6ATAC18P LINC02766 SNORA59A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02766 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02766 Gene

Genomic Locations for LINC02766 Gene
chr1:12,525,280-12,528,868
(GRCh38/hg38)
Size:
3,589 bases
Orientation:
Plus strand
chr1:12,587,766-12,588,462
(GRCh37/hg19)
Size:
697 bases
Orientation:
Plus strand

Genomic View for LINC02766 Gene

Genes around LINC02766 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02766 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02766 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02766 Gene

Proteins for LINC02766 Gene

Post-translational modifications for LINC02766 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02766 Gene

Domains & Families for LINC02766 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02766 Gene

Function for LINC02766 Gene

Phenotypes From GWAS Catalog for LINC02766 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02766 Gene

Localization for LINC02766 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02766 Gene

Pathways & Interactions for LINC02766 Gene

PathCards logo

SuperPathways for LINC02766 Gene

No Data Available

Interacting Proteins for LINC02766 Gene

Gene Ontology (GO) - Biological Process for LINC02766 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02766 Gene

Drugs & Compounds for LINC02766 Gene

No Compound Related Data Available

Transcripts for LINC02766 Gene

mRNA/cDNA for LINC02766 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02766 Gene

No ASD Table

Relevant External Links for LINC02766 Gene

GeneLoc Exon Structure for
LINC02766
ECgene alternative splicing isoforms for
LINC02766

Expression for LINC02766 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02766 Gene

Orthologs for LINC02766 Gene

Evolution for LINC02766 Gene

ENSEMBL:
Gene Tree for LINC02766 (if available)
TreeFam:
Gene Tree for LINC02766 (if available)

No data available for Orthologs for LINC02766 Gene

Paralogs for LINC02766 Gene

No data available for Paralogs for LINC02766 Gene

Variants for LINC02766 Gene

Sequence variations from dbSNP and Humsavar for LINC02766 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000318689 -- 12,523,605(+) C/T upstream_transcript_variant
rs1000866397 -- 12,526,435(+) A/G intron_variant
rs1000918946 -- 12,526,691(+) T/G intron_variant
rs1001363576 -- 12,528,853(+) G/A non_coding_transcript_variant
rs1001374379 -- 12,523,274(+) C/T upstream_transcript_variant

Additional Variant Information for LINC02766 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02766

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02766 Gene

Disorders for LINC02766 Gene

No disorders were found for LINC02766 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02766 Gene

Publications for LINC02766 Gene

No publications were found for LINC02766 Gene.

No data available for External Links for LINC02766 Gene

Products for LINC02766 Gene

Sources for LINC02766 Gene

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