Aliases for LINC02764 Gene

Data sources for LINC02764 Gene:

Subcategory (RNA class) for LINC02764 Gene

lncRNA

Aliases for LINC02764 Gene

External Ids for LINC02764 Gene

Summaries for LINC02764 Gene

GeneCards Summary for LINC02764 Gene

LINC02764 (Long Intergenic Non-Protein Coding RNA 2764) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02764 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02764 Gene

Genomics for LINC02764 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02764 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J112563 Enhancer 0.8 Ensembl ENCODE 250.7 +0.4 437 1.8 ZIC2 FOXA2 RXRA ZBTB33 JUND FOXP1 SOX5 HNF4A FOXA1 RAD21 LINC02764 LINC02762 HSALNG0087207 RF00017-1030 LINC02763 PLET1 NCAM1
GH11J112555 Enhancer 0.7 Ensembl ENCODE 0.4 +9.2 9229 0.6 CTCF REST SMC3 YY1 RAD21 ZNF143 ZNF148 KDM3A TRIM28 XRCC5 LINC02764 RF00017-1030 LINC02763 PLET1 NCAM1
GH11J112541 Enhancer 0.4 Ensembl 0.3 +23.0 23036 1.8 EGR2 ZFHX2 PRDM1 LINC02762 RF00017-1030 LINC02764 HSALNG0087206-002 LINC02763 PLET1 NCAM1
GH11J112537 Enhancer 0.3 Ensembl ENCODE 0.3 +26.5 26536 4.4 LINC02762 RF00017-1030 HSALNG0087206-002 LINC02764 LINC02763 PLET1 NCAM1
GH11J112543 Enhancer 0.3 Ensembl 0.3 +21.8 21836 0.2 PRDM1 DRD2 IL18 RF00017-1030 LINC02764 HSALNG0087206-002 LINC02763 PLET1 NCAM1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02764 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02764 Gene

Latest Assembly
chr11:112,534,219-112,565,137
(GRCh38/hg38)
Size:
30,919 bases
Orientation:
Minus strand

Previous Assembly
chr11:112,404,943-112,426,525
(GRCh37/hg19 by Entrez Gene)
Size:
21,583 bases
Orientation:
Minus strand

chr11:112,404,945-112,426,525
(GRCh37/hg19 by Ensembl)
Size:
21,581 bases
Orientation:
Minus strand

Genomic View for LINC02764 Gene

Genes around LINC02764 on UCSC Golden Path with GeneCards custom track
LINC02764 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC02764 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02764 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02764 Gene

Proteins for LINC02764 Gene

Post-translational modifications for LINC02764 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02764 Gene

Domains & Families for LINC02764 Gene

Gene Families for LINC02764 Gene

genes like me logo Genes that share domains with LINC02764: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02764 Gene

Function for LINC02764 Gene

Phenotypes From GWAS Catalog for LINC02764 Gene

Phenotypes for LINC02764 Gene

genes like me logo Genes that share phenotypes with LINC02764: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02764 Gene

Localization for LINC02764 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02764 Gene

Pathways & Interactions for LINC02764 Gene

PathCards logo

SuperPathways for LINC02764 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02764 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02764 Gene

Drugs & Compounds for LINC02764 Gene

No Compound Related Data Available

Transcripts for LINC02764 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02764 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000076115D_9606 lncRNA 2067 2

Ensembl: ENST00000525984 (view in UCSC) ,

LNCipedia: lnc-PLET1-1:2,

URS000075D9A0_9606 lncRNA 2065 1

RefSeq: NR_104155,

URS00000B51E0_9606 lncRNA 2065 2

LNCipedia: lnc-PLET1-1:1,

NONCODE: NONHSAT024222.2,

URS00009BB2A2_9606 lncRNA 2065 2

LncBook: HSALNT0181208,

NONCODE: NONHSAT160733.1,

URS0001BE1889_9606 lncRNA 2931 1

LncBook: HSALNT0181206,

LINC02764 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC02764 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02764 Gene

No ASD Table

Relevant External Links for LINC02764 Gene

GeneLoc Exon Structure for
LINC02764

Expression for LINC02764 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC02764

SOURCE GeneReport for Unigene cluster for LINC02764 Gene:

Hs.512255
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02764 Gene

Orthologs for LINC02764 Gene

Evolution for LINC02764 Gene

ENSEMBL:
Gene Tree for LINC02764 (if available)
TreeFam:
Gene Tree for LINC02764 (if available)

No data available for Orthologs for LINC02764 Gene

Paralogs for LINC02764 Gene

No data available for Paralogs for LINC02764 Gene

Variants for LINC02764 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC02764 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for LINC02764 Gene

Variant ID Type Subtype PubMed ID
esv24302 CNV gain 19812545

Additional Variant Information for LINC02764 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02764

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for LINC02764 Gene

Disorders for LINC02764 Gene

Additional Disease Information for LINC02764

Open Targets Platform
Open Targets Platform

No disorders were found for LINC02764 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02764 Gene

Publications for LINC02764 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

No data available for Mastermind for LINC02764 Gene

Products for LINC02764 Gene

Sources for LINC02764 Gene