LINC02764 Gene (RNA Gene)

Long Intergenic Non-Protein Coding RNA 2764

GC11M112535
GIFtS:
10

Aliases for LINC02764 Gene

Subcategory (RNA class) for LINC02764 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for LINC02764 Gene

  • Long Intergenic Non-Protein Coding RNA 2764 2 3
  • Novel Transcript 5
  • HSALNG0087207 169
  • NONHSAG009633 94
  • Lnc-PLET1-1 170
  • AP003063.2 5

External Ids for LINC02764 Gene

Summaries for LINC02764 Gene

GeneCards Summary for LINC02764 Gene

LINC02764 (Long Intergenic Non-Protein Coding RNA 2764) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02764 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02764 Gene

Genomics for LINC02764 Gene

GeneHancer (GH) Regulatory Elements for LINC02764 Gene

Promoters and enhancers for LINC02764 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH11J112555 Enhancer 0.7 Ensembl ENCODE 750.6 -0.1 -105 0.6 CTCF RAD21 ZNF148 REST ZNF143 XRCC5 RB1 KDM3A LINC02764 ENSG00000212397 LINC02763
GH11J112554 Enhancer 0.3 Ensembl 750.6 +0.9 902 0.2 ZIC2 LINC02764 RF00017-1030 LINC02763
GH11J112563 Enhancer 0.8 Ensembl ENCODE 0.4 -8.9 -8897 1.8 FOXA1 RAD21 SP1 ZIC2 RXRA FOXA2 JUND ATF3 YY1 ZBTB33 LINC02762 LINC02764 ENSG00000212397 LINC02763
GH11J112587 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.3 -33.0 -32970 1.9 CTCF ZBTB6 MAX RAD21 MLLT1 REST TRIM22 ZNF143 ZBTB17 BCLAF1 NCAM1 ENSG00000212397 LINC02764 LINC02763
GH11J112578 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 -25.5 -25533 4.8 SP1 JUND ETV6 RELA CREM IKZF1 IKZF2 ZNF143 PKNOX1 CBFB LINC02762 ENSG00000212397 LINC02764 LINC02763
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02764 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02764 Gene

Genomic Locations for LINC02764 Gene
chr11:112,534,220-112,555,803
(GRCh38/hg38)
Size:
21,584 bases
Orientation:
Minus strand
chr11:112,404,945-112,426,525
(GRCh37/hg19)
Size:
21,581 bases
Orientation:
Minus strand

Genomic View for LINC02764 Gene

Genes around LINC02764 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02764 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02764 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LINC02764 Gene

Proteins for LINC02764 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LINC02764 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02764 Gene

Domains & Families for LINC02764 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02764 Gene

Function for LINC02764 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for LINC02764 Gene

Phenotypes for LINC02764 Gene

GenomeRNAi human phenotypes for LINC02764:
genes like me logo Genes that share phenotypes with LINC02764: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02764 Gene

Localization for LINC02764 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02764 Gene

Pathways & Interactions for LINC02764 Gene

PathCards logo

SuperPathways for LINC02764 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02764 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02764 Gene

Drugs & Compounds for LINC02764 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LINC02764 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for LINC02764 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(4) RNACentral transcripts :
(2) NONCODE transcripts :
(1) LncBook transcripts :
(2) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02764 Gene

No ASD Table

Relevant External Links for LINC02764 Gene

GeneLoc Exon Structure for
LINC02764
ECgene alternative splicing isoforms for
LINC02764

Expression for LINC02764 Gene

Products:

  1. Primer

SOURCE GeneReport for Unigene cluster for LINC02764 Gene:

Hs.512255
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02764 Gene

Orthologs for LINC02764 Gene

Evolution for LINC02764 Gene

ENSEMBL:
Gene Tree for LINC02764 (if available)
TreeFam:
Gene Tree for LINC02764 (if available)

No data available for Orthologs for LINC02764 Gene

Paralogs for LINC02764 Gene

No data available for Paralogs for LINC02764 Gene

Variants for LINC02764 Gene

Sequence variations from dbSNP and Humsavar for LINC02764 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000090636 -- 112,556,108(-) A/T upstream_transcript_variant
rs1000130175 -- 112,534,193(-) A/G downstream_transcript_variant
rs1000155336 -- 112,547,510(-) A/C intron_variant
rs1000164667 -- 112,538,304(-) T/C intron_variant
rs1000226632 -- 112,557,713(-) A/G upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for LINC02764 Gene

Variant ID Type Subtype PubMed ID
esv24302 CNV gain 19812545

Additional Variant Information for LINC02764 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02764

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for LINC02764 Gene

Disorders for LINC02764 Gene

No disorders were found for LINC02764 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02764 Gene

Publications for LINC02764 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 56

No data available for External Links for LINC02764 Gene

Products for LINC02764 Gene

Sources for LINC02764 Gene