Aliases for LINC02763 Gene

Data sources for LINC02763 Gene:

Subcategory (RNA class) for LINC02763 Gene

lncRNA

Aliases for LINC02763 Gene

External Ids for LINC02763 Gene

Summaries for LINC02763 Gene

GeneCards Summary for LINC02763 Gene

LINC02763 (Long Intergenic Non-Protein Coding RNA 2763) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02763 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02763 Gene

Genomics for LINC02763 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02763 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J112400 Enhancer 0.3 Ensembl 0.4 +7.6 7584 0.2 ZIC2 CREB1 RNU6-44P LINC02762 LINC02763 RPL23AP62 lnc-PLET1-4 PLET1 NCAM1
GH11J112408 Enhancer 0.3 Ensembl ENCODE 0.4 +15.8 15784 1.4 RNU6-44P LINC02763 RPL23AP62 lnc-PLET1-4 PLET1 NCAM1
GH11J112523 Enhancer 1 FANTOM5 Ensembl ENCODE 0.1 +132.5 132483 8.4 ZIC2 ZNF316 GLIS1 ZNF398 SP7 MAX TRIM28 ZNF558 PRDM10 CBX8 LINC02762 RNU6-44P KCTD9P4 IL18 HSALNG0087206-002 RF00017-1030 LINC02763 PLET1 NCAM1
GH11J112409 Enhancer 0.3 Ensembl 0.4 +17.4 17384 0.6 SPI1 RNU6-44P LINC02763 RPL23AP62 lnc-PLET1-4 PLET1 NCAM1
GH11J112421 Enhancer 0.3 Ensembl 0.3 +28.9 28884 0.4 GATA2 LINC02763 lnc-PLET1-4 RPL23AP62 PLET1 NCAM1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02763 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02763 Gene

Latest Assembly
chr11:112,393,117-112,624,645
(GRCh38/hg38)
Size:
231,529 bases
Orientation:
Plus strand

Previous Assembly
chr11:112,352,955-112,412,639
(GRCh37/hg19 by Entrez Gene)
Size:
59,685 bases
Orientation:
Plus strand

chr11:112,263,841-112,492,452
(GRCh37/hg19 by Ensembl)
Size:
228,612 bases
Orientation:
Plus strand

Genomic View for LINC02763 Gene

Genes around LINC02763 on UCSC Golden Path with GeneCards custom track
LINC02763 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC02763 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02763 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02763 Gene

Proteins for LINC02763 Gene

Post-translational modifications for LINC02763 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02763 Gene

Domains & Families for LINC02763 Gene

Gene Families for LINC02763 Gene

genes like me logo Genes that share domains with LINC02763: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02763 Gene

Function for LINC02763 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02763 Gene

Localization for LINC02763 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02763 Gene

Pathways & Interactions for LINC02763 Gene

PathCards logo

SuperPathways for LINC02763 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02763 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02763 Gene

Drugs & Compounds for LINC02763 Gene

No Compound Related Data Available

Transcripts for LINC02763 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02763 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075BDBC_9606 lncRNA 962 4

RefSeq: NR_120559,

LncBook: HSALNT0181191,

LNCipedia: lnc-PTS-3:5,

NONCODE: NONHSAT159661.1,

URS00001270C1_9606 lncRNA 855 4

Ensembl: ENST00000528496 (view in UCSC) ,

LncBook: HSALNT0181186,

LNCipedia: lnc-PTS-3:1,

NONCODE: NONHSAT024218.2,

URS0000049FAC_9606 lncRNA 464 4

Ensembl: ENST00000529827 (view in UCSC) ,

LncBook: HSALNT0181194,

LNCipedia: lnc-PTS-3:4,

NONCODE: NONHSAT024221.2,

URS00005AC0C6_9606 lncRNA 524 3

Ensembl: ENST00000529238 (view in UCSC) ,

LncBook: HSALNT0181192,

LNCipedia: lnc-PTS-3:3,

URS0000EF0AF9_9606 lncRNA 1134 1

Ensembl: ENST00000665326 (view in UCSC) ,

LINC02763 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC02763 Gene

3 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02763 Gene

No ASD Table

Relevant External Links for LINC02763 Gene

GeneLoc Exon Structure for
LINC02763

Expression for LINC02763 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC02763

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02763 Gene

Orthologs for LINC02763 Gene

Evolution for LINC02763 Gene

ENSEMBL:
Gene Tree for LINC02763 (if available)
TreeFam:
Gene Tree for LINC02763 (if available)

No data available for Orthologs for LINC02763 Gene

Paralogs for LINC02763 Gene

No data available for Paralogs for LINC02763 Gene

Variants for LINC02763 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC02763 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for LINC02763 Gene

Variant ID Type Subtype PubMed ID
esv2659258 CNV deletion 23128226
esv3579911 CNV loss 25503493
esv3627759 CNV loss 21293372
nsv1052776 CNV loss 25217958

Additional Variant Information for LINC02763 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02763

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for LINC02763 Gene

Disorders for LINC02763 Gene

No disorders were found for LINC02763 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02763 Gene

Publications for LINC02763 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

No data available for Mastermind for LINC02763 Gene

Products for LINC02763 Gene

Sources for LINC02763 Gene