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Aliases for LINC02754 Gene

Subcategory (RNA class) for LINC02754 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for LINC02754 Gene

  • Long Intergenic Non-Protein Coding RNA 2754 2 3
  • Novel Transcript 5
  • AP003716.1 5

External Ids for LINC02754 Gene

Summaries for LINC02754 Gene

GeneCards Summary for LINC02754 Gene

LINC02754 (Long Intergenic Non-Protein Coding RNA 2754) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC02754 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02754 Gene

Genomics for LINC02754 Gene

GeneHancer (GH) Regulatory Elements for LINC02754 Gene

Promoters and enhancers for LINC02754 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J067883 Promoter/Enhancer 1.2 Ensembl ENCODE 608.1 +1.9 1915 5.6 ZNF652 RFX1 ZNF316 OSR2 ELF1 ZBTB17 MAFG ZNF335 HNF4A NFIL3 LINC02754 PIR39068 GC11P067888 ENSG00000255031 PTPRCAP
GH11J067859 Enhancer 0.4 Ensembl 6.1 -24.3 -24299 0.4 REST CTCF LINC02754 ENSG00000255031 ENPP7P7 ENSG00000254792
GH11J067920 Enhancer 0.2 Ensembl 6.9 +36.7 36702 1.6 PTPRCAP LINC02754 RPS3AP40 GC11M067903
GH11J067877 Enhancer 0.2 Ensembl 6.4 -6.6 -6598 1.4 ENSG00000255031 LINC02754 ENPP7P7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02754 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02754 Gene

Genomic Locations for LINC02754 Gene
9,798 bases
Plus strand

Genomic View for LINC02754 Gene

Genes around LINC02754 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02754 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02754 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02754 Gene

Proteins for LINC02754 Gene

Post-translational modifications for LINC02754 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02754 Gene

Domains & Families for LINC02754 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02754 Gene

Function for LINC02754 Gene

Phenotypes From GWAS Catalog for LINC02754 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02754 Gene

Localization for LINC02754 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02754 Gene

Pathways & Interactions for LINC02754 Gene

PathCards logo

SuperPathways for LINC02754 Gene

No Data Available

Interacting Proteins for LINC02754 Gene

Gene Ontology (GO) - Biological Process for LINC02754 Gene


No data available for Pathways by source and SIGNOR curated interactions for LINC02754 Gene

Drugs & Compounds for LINC02754 Gene

No Compound Related Data Available

Transcripts for LINC02754 Gene

mRNA/cDNA for LINC02754 Gene

(1) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(3) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02754 Gene

No ASD Table

Relevant External Links for LINC02754 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for LINC02754 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02754 Gene

Orthologs for LINC02754 Gene

Evolution for LINC02754 Gene

Gene Tree for LINC02754 (if available)
Gene Tree for LINC02754 (if available)

No data available for Orthologs for LINC02754 Gene

Paralogs for LINC02754 Gene

No data available for Paralogs for LINC02754 Gene

Variants for LINC02754 Gene

Sequence variations from dbSNP and Humsavar for LINC02754 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000072746 -- 67,894,507(+) G/T downstream_transcript_variant
rs1000384021 -- 67,890,250(+) C/T intron_variant
rs1000969962 -- 67,882,094(+) G/A/T upstream_transcript_variant
rs1001063742 -- 67,886,559(+) A/G intron_variant, non_coding_transcript_variant
rs1001307069 -- 67,886,623(+) G/C intron_variant, non_coding_transcript_variant

Additional Variant Information for LINC02754 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02754 Gene

Disorders for LINC02754 Gene

No disorders were found for LINC02754 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02754 Gene

Publications for LINC02754 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

No data available for External Links for LINC02754 Gene

Products for LINC02754 Gene

Sources for LINC02754 Gene

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