Aliases for LINC02751 Gene

Data sources for LINC02751 Gene:

Subcategory (RNA class) for LINC02751 Gene

lncRNA

Aliases for LINC02751 Gene

External Ids for LINC02751 Gene

Summaries for LINC02751 Gene

GeneCards Summary for LINC02751 Gene

LINC02751 (Long Intergenic Non-Protein Coding RNA 2751) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02751 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02751 Gene

Genomics for LINC02751 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02751 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J015552 Promoter/Enhancer 0.9 Ensembl ENCODE dbSUPER 250.7 0.0 -20 1.2 RCOR1 CHD2 EZH2 LINC02751 ENSG00000254789 HSALNG0082863 lnc-SOX6-6 INSC
GH11J015550 Enhancer 0.3 Ensembl 250.7 -1.9 -1949 0.4 ZNF664 LINC02751 HSALNG0082863 lnc-SOX6-6 INSC
GH11J015547 Enhancer 0.6 Ensembl ENCODE dbSUPER 0.7 -4.9 -4947 1.1 EZH2 LINC02751 HSALNG0082863 lnc-SOX6-6 INSC
GH11J015577 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.3 +26.2 26151 7 HES1 REST TAL1 RXRA FOXA2 ZFP91 ZNF316 FOSL1 SPI1 NFE2 lnc-SOX6-6 INSC ENSG00000253072 ENSG00000254789 piR-55985-023 LINC02751 LOC105376568
GH11J015557 Enhancer 0.6 Ensembl dbSUPER 0.4 +6.0 5951 2.2 SPI1 REST ZNF366 NANOG ZNF512 PRDM1 piR-35564-020 LINC02751 lnc-SOX6-6 INSC
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02751 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02751 Gene

Latest Assembly
chr11:15,552,750-15,705,681
(GRCh38/hg38)
Size:
152,932 bases
Orientation:
Plus strand

Previous Assembly
chr11:15,574,319-15,726,918
(GRCh37/hg19 by Entrez Gene)
Size:
152,600 bases
Orientation:
Plus strand

chr11:15,574,401-15,612,644
(GRCh37/hg19 by Ensembl)
Size:
38,244 bases
Orientation:
Plus strand

Genomic View for LINC02751 Gene

Genes around LINC02751 on UCSC Golden Path with GeneCards custom track
LINC02751 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC02751 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02751 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02751 Gene

Proteins for LINC02751 Gene

Post-translational modifications for LINC02751 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02751 Gene

Domains & Families for LINC02751 Gene

Gene Families for LINC02751 Gene

genes like me logo Genes that share domains with LINC02751: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02751 Gene

Function for LINC02751 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02751 Gene

Localization for LINC02751 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02751 Gene

Pathways & Interactions for LINC02751 Gene

PathCards logo

SuperPathways for LINC02751 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02751 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02751 Gene

Drugs & Compounds for LINC02751 Gene

No Compound Related Data Available

Transcripts for LINC02751 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02751 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000052A6A6_9606 lncRNA 571 3

Ensembl: ENST00000527770 (view in UCSC) ,

LNCipedia: lnc-INSC-2:10,

NONCODE: NONHSAT018152.2,

URS0000EF1321_9606 lncRNA 743 2

RefSeq: NR_169504,

Ensembl: ENST00000659618 (view in UCSC) ,

URS0001BBE527_9606 lncRNA 1533 1

RefSeq: NR_169506,

URS0001BBE488_9606 lncRNA 1094 1

RefSeq: NR_169503,

URS0001BBE4A4_9606 lncRNA 1080 1

RefSeq: NR_169502,

LINC02751 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC02751 Gene

1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02751 Gene

No ASD Table

Relevant External Links for LINC02751 Gene

GeneLoc Exon Structure for
LINC02751

Expression for LINC02751 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC02751

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02751 Gene

Orthologs for LINC02751 Gene

Evolution for LINC02751 Gene

ENSEMBL:
Gene Tree for LINC02751 (if available)
TreeFam:
Gene Tree for LINC02751 (if available)

No data available for Orthologs for LINC02751 Gene

Paralogs for LINC02751 Gene

No data available for Paralogs for LINC02751 Gene

Variants for LINC02751 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC02751 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LINC02751 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02751

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02751 Gene

Disorders for LINC02751 Gene

No disorders were found for LINC02751 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02751 Gene

Publications for LINC02751 Gene

  1. Multistage genome-wide association meta-analyses identified two new loci for bone mineral density. (PMID: 24249740) Zhang L … Deng HW (Human molecular genetics 2014) 3
  2. Genome-wide meta-analysis identifies 56 bone mineral density loci and reveals 14 loci associated with risk of fracture. (PMID: 22504420) Estrada K … Rivadeneira F (Nature genetics 2012) 3
  3. Twenty bone-mineral-density loci identified by large-scale meta-analysis of genome-wide association studies. (PMID: 19801982) Rivadeneira F … Genetic Factors for Osteoporosis (GEFOS) Consortium (Nature genetics 2009) 3

No data available for Mastermind for LINC02751 Gene

Products for LINC02751 Gene

Sources for LINC02751 Gene