Aliases for LINC02748 Gene

Subcategory (RNA class) for LINC02748 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC02748 Gene

  • Long Intergenic Non-Protein Coding RNA 2748 2 3 5
  • LINC02748 2 5
  • NONHSAG009346.2 91
  • HSALNG0086393 164
  • Lnc-NAALAD2-4 165

External Ids for LINC02748 Gene

Summaries for LINC02748 Gene

GeneCards Summary for LINC02748 Gene

LINC02748 (Long Intergenic Non-Protein Coding RNA 2748) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02748 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02748 Gene

Genomics for LINC02748 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02748 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J091158 Enhancer 0.5 Ensembl 600.7 +0.9 910 1.4 POLR2A GATA3 JUND JUN FOS SMARCA4 LINC02748 ENSG00000280124 CHORDC1
GH11J091162 Enhancer 0.7 Ensembl ENCODE 5.2 +6.0 5994 2.8 SP1 JUND ESR1 NR3C1 MAFF MAFK FOSL2 RCOR1 GATA2 LINC02748 ENSG00000280124 CHORDC1
GH11J091219 Enhancer 0.6 Ensembl ENCODE 0.2 +62.2 62151 2.1 POLR2A CEBPB CTCF ENSG00000278980 piR-39098-041 LINC02748 CHORDC1
GH11J091160 Enhancer 0.2 Ensembl 0.7 +2.7 2710 0.6 LINC02748 ENSG00000280124 CHORDC1
GH11J091132 Enhancer 0.3 Ensembl 0.4 -24.7 -24690 1 REST OSBPL9P2 LINC02748 CHORDC1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02748 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02748 Gene

Genomic Locations for LINC02748 Gene
chr11:91,157,991-91,234,388
(GRCh38/hg38)
Size:
76,398 bases
Orientation:
Plus strand
chr11:90,891,251-90,900,462
(GRCh37/hg19)
Size:
9,212 bases
Orientation:
Plus strand

Genomic View for LINC02748 Gene

Genes around LINC02748 on UCSC Golden Path with GeneCards custom track
LINC02748 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC02748 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02748 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02748 Gene

Proteins for LINC02748 Gene

Post-translational modifications for LINC02748 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02748 Gene

Domains & Families for LINC02748 Gene

Gene Families for LINC02748 Gene

genes like me logo Genes that share domains with LINC02748: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02748 Gene

Function for LINC02748 Gene

Phenotypes From GWAS Catalog for LINC02748 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02748 Gene

Localization for LINC02748 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02748 Gene

Pathways & Interactions for LINC02748 Gene

PathCards logo

SuperPathways for LINC02748 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02748 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02748 Gene

Drugs & Compounds for LINC02748 Gene

No Compound Related Data Available

Transcripts for LINC02748 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02748 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000EF6A2F_9606 lncRNA 1054 2

HGNC: 54267,

Ensembl: ENST00000666286 (view in UCSC) ,

URS0000EF57CE_9606 lncRNA 998 1

Ensembl: ENST00000526509 (view in UCSC) ,

URS00003D9BE4_9606 lncRNA 504 3

LncBook: HSALNT0179648,

LNCipedia: lnc-NAALAD2-4:2,

NONCODE: NONHSAT023598.2,

URS00008B430D_9606 lncRNA 456 3

LncBook: HSALNT0179650,

LNCipedia: lnc-NAALAD2-4:3,

NONCODE: NONHSAT023599.2,

URS00009AFD4E_9606 lncRNA 574 2

LncBook: HSALNT0179649,

NONCODE: NONHSAT159524.1,

LINC02748 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02748 Gene

No ASD Table

Relevant External Links for LINC02748 Gene

GeneLoc Exon Structure for
LINC02748

No data available for mRNA/cDNA for LINC02748 Gene

Expression for LINC02748 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02748 Gene

Orthologs for LINC02748 Gene

Evolution for LINC02748 Gene

ENSEMBL:
Gene Tree for LINC02748 (if available)
TreeFam:
Gene Tree for LINC02748 (if available)

No data available for Orthologs for LINC02748 Gene

Paralogs for LINC02748 Gene

No data available for Paralogs for LINC02748 Gene

Variants for LINC02748 Gene

Additional dbSNP identifiers (rs#s) for LINC02748 Gene

Additional Variant Information for LINC02748 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02748

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02748 Gene

Disorders for LINC02748 Gene

No disorders were found for LINC02748 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02748 Gene

Publications for LINC02748 Gene

No publications were found for LINC02748 Gene.

No data available for Mastermind for LINC02748 Gene

Products for LINC02748 Gene

Sources for LINC02748 Gene