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Aliases for LINC02732 Gene

Subcategory (RNA class) for LINC02732 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for LINC02732 Gene

  • Long Intergenic Non-Protein Coding RNA 2732 2 3
  • Novel Transcript 5
  • AP000924.1 5

External Ids for LINC02732 Gene

Summaries for LINC02732 Gene

GeneCards Summary for LINC02732 Gene

LINC02732 (Long Intergenic Non-Protein Coding RNA 2732) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC02732 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02732 Gene

Genomics for LINC02732 Gene

GeneHancer (GH) Regulatory Elements for LINC02732 Gene

Promoters and enhancers for LINC02732 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J110354 Promoter/Enhancer 2.1 EPDnew FANTOM5 Ensembl ENCODE 621.3 +1.5 1480 4.2 CEBPG NCOA3 MAFK SP7 SP1 FOSL2 CREB1 RXRA NFE2L2 CEBPA LINC02732 FDX1 RDX ZC3H12C PIR61577
GH11J110372 Enhancer 1.1 FANTOM5 ENCODE 11.1 +18.9 18888 3.2 SP1 ZNF687 JUND RELA CREM ZBED1 IKZF1 BACH1 IKZF2 PKNOX1 FDX1 LINC02732 ZC3H12C RDX PIR61577
GH11J110362 Enhancer 0.8 ENCODE 10.2 +8.2 8243 2.6 SP1 IKZF1 IKZF2 GATAD2A ZNF692 FOXA2 ZNF561 JUND YY1 GABPA LINC02732 RDX PIR61577
GH11J110365 Enhancer 0.7 Ensembl ENCODE 10.8 +11.2 11246 1.1 MAFK CEBPB SCRT2 NFIC MAFF EMSY LINC02732 RDX PIR61577
GH11J110347 Enhancer 1 FANTOM5 ENCODE 7.1 -6.3 -6309 3.3 SP1 ZNF687 JUND RELA CREM MLLT1 RAD21 ZBED1 IKZF1 BACH1 FDX1 RDX ZC3H12C LINC02732
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02732 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02732 Gene

Genomic Locations for LINC02732 Gene
chr11:110,355,114-110,406,423
(GRCh38/hg38)
Size:
51,310 bases
Orientation:
Plus strand
chr11:110,225,855-110,277,124
(GRCh37/hg19)
Size:
51,270 bases
Orientation:
Plus strand

Genomic View for LINC02732 Gene

Genes around LINC02732 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02732 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02732 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02732 Gene

Proteins for LINC02732 Gene

Post-translational modifications for LINC02732 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02732 Gene

Domains & Families for LINC02732 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02732 Gene

Function for LINC02732 Gene

Phenotypes From GWAS Catalog for LINC02732 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02732 Gene

Localization for LINC02732 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02732 Gene

Pathways & Interactions for LINC02732 Gene

PathCards logo

SuperPathways for LINC02732 Gene

No Data Available

Interacting Proteins for LINC02732 Gene

Gene Ontology (GO) - Biological Process for LINC02732 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02732 Gene

Drugs & Compounds for LINC02732 Gene

No Compound Related Data Available

Transcripts for LINC02732 Gene

mRNA/cDNA for LINC02732 Gene

(3) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(3) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02732 Gene

No ASD Table

Relevant External Links for LINC02732 Gene

GeneLoc Exon Structure for
LINC02732
ECgene alternative splicing isoforms for
LINC02732

Expression for LINC02732 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02732 Gene

Orthologs for LINC02732 Gene

Evolution for LINC02732 Gene

ENSEMBL:
Gene Tree for LINC02732 (if available)
TreeFam:
Gene Tree for LINC02732 (if available)

No data available for Orthologs for LINC02732 Gene

Paralogs for LINC02732 Gene

No data available for Paralogs for LINC02732 Gene

Variants for LINC02732 Gene

Sequence variations from dbSNP and Humsavar for LINC02732 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000011494 -- 110,398,478(+) C/G intron_variant
rs1000020846 -- 110,394,113(+) A/G intron_variant
rs1000053791 -- 110,384,581(+) C/T intron_variant
rs1000079870 -- 110,399,854(+) C/T intron_variant
rs1000081630 -- 110,389,249(+) T/C intron_variant

Additional Variant Information for LINC02732 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02732

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02732 Gene

Disorders for LINC02732 Gene

No disorders were found for LINC02732 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02732 Gene

Publications for LINC02732 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58

No data available for External Links for LINC02732 Gene

Products for LINC02732 Gene

Sources for LINC02732 Gene

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