Aliases for LINC02732 Gene

Data sources for LINC02732 Gene:

RNA type for LINC02732 Gene

lncRNA

Aliases for LINC02732 Gene

External Ids for LINC02732 Gene

Summaries for LINC02732 Gene

GeneCards Summary for LINC02732 Gene

LINC02732 (Long Intergenic Non-Protein Coding RNA 2732) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02732 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02732 Gene

Genomics for LINC02732 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02732 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J110327 Enhancer 0.7 ENCODE 250.7 +0.5 480 2.4 SP1 ZNF207 BCL11A IRF4 ZNF585B BATF ELF1 IKZF1 TCF7 MTA3 LINC02732 lnc-FDX1-1 piR-49406-002 RDX FDX1
GH11J110354 Promoter/Enhancer 1.7 EPDnew FANTOM5 Ensembl ENCODE 20.9 +28.2 28235 4.2 CEBPA BRCA1 YY1 CEBPB MAX EP300 MBD2 FOXA2 CTBP1 RXRA FDX1 LINC02732 RDX ZC3H12C piR-47675-019 LOC107984385
GH11J110372 Enhancer 1 FANTOM5 ENCODE 11 +45.6 45643 3.2 BCLAF1 SP1 BCL11A CEBPB EP300 SMARCA5 MAX PRDM6 TAF1 BHLHE40 FDX1 LINC02732 ZC3H12C RDX HSALNG0087056 LOC107984385 lnc-RDX-4 piR-47675-019
GH11J110362 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas 10.1 +34.9 34942 3 YY1 FOXA2 RXRA ETV4 TBP EBF1 FOXP1 SOX5 JUND HNF4A LINC02732 FDX1 RDX LOC107984385 piR-47675-019
GH11J110347 Enhancer 1.3 FANTOM5 Ensembl ENCODE 7 +19.6 19641 5.2 BCLAF1 SP1 CEBPA ATF3 YY1 BCL11A CEBPB ZNF592 TRIM22 HOMEZ FDX1 RDX ZC3H12C LINC02732 COLCA2 piR-47675-019 LOC107984385
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02732 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02732 Gene

Latest Assembly
chr11:110,328,359-110,407,738
(GRCh38/hg38)
Size:
79,380 bases
Orientation:
Plus strand

Previous Assembly
chr11:110,225,839-110,277,632
(GRCh37/hg19 by Entrez Gene)
Size:
51,794 bases
Orientation:
Plus strand

chr11:110,225,855-110,277,124
(GRCh37/hg19 by Ensembl)
Size:
51,270 bases
Orientation:
Plus strand

Genomic View for LINC02732 Gene

Genes around LINC02732 on UCSC Golden Path with GeneCards custom track
LINC02732 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC02732 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02732 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02732 Gene

Proteins for LINC02732 Gene

Post-translational modifications for LINC02732 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02732 Gene

Domains & Families for LINC02732 Gene

Gene Families for LINC02732 Gene

genes like me logo Genes that share domains with LINC02732: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02732 Gene

Function for LINC02732 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02732 Gene

Localization for LINC02732 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02732 Gene

Pathways & Interactions for LINC02732 Gene

PathCards logo

SuperPathways for LINC02732 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02732 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02732 Gene

Drugs & Compounds for LINC02732 Gene

No Compound Related Data Available

Transcripts for LINC02732 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02732 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000EF01CA_9606 lncRNA 1960 1

Ensembl: ENST00000662858 (view in UCSC) ,

URS0000EF0BA1_9606 lncRNA 1933 1

Ensembl: ENST00000526605 (view in UCSC) ,

URS0000EEB7D9_9606 lncRNA 1838 1

Ensembl: ENST00000661010 (view in UCSC) ,

URS0000EF688D_9606 lncRNA 1679 1

Ensembl: ENST00000655839 (view in UCSC) ,

URS0000ABD8E2_9606 lncRNA 1340 1

RefSeq: NR_135100,

LINC02732 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC02732 Gene

3 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02732 Gene

No ASD Table

Relevant External Links for LINC02732 Gene

GeneLoc Exon Structure for
LINC02732

Expression for LINC02732 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02732 Gene

Orthologs for LINC02732 Gene

Evolution for LINC02732 Gene

ENSEMBL:
Gene Tree for LINC02732 (if available)
TreeFam:
Gene Tree for LINC02732 (if available)
Alliance of Genome Resources:
Additional Orthologs for LINC02732

No data available for Orthologs for LINC02732 Gene

Paralogs for LINC02732 Gene

No data available for Paralogs for LINC02732 Gene

Variants for LINC02732 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC02732 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LINC02732 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02732
Leiden Open Variation Database (LOVD)
LINC02732

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02732 Gene

Disorders for LINC02732 Gene

Additional Disease Information for LINC02732

Open Targets Platform
Open Targets Platform

No disorders were found for LINC02732 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02732 Gene

Publications for LINC02732 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3

No data available for Mastermind for LINC02732 Gene

Products for LINC02732 Gene

Sources for LINC02732 Gene