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Aliases for LINC02729 Gene

Subcategory (RNA class) for LINC02729 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for LINC02729 Gene

  • Long Intergenic Non-Protein Coding RNA 2729 2 3
  • Novel Transcript 5
  • AC124301.2 5

External Ids for LINC02729 Gene

Summaries for LINC02729 Gene

GeneCards Summary for LINC02729 Gene

LINC02729 (Long Intergenic Non-Protein Coding RNA 2729) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC02729 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02729 Gene

Genomics for LINC02729 Gene

GeneHancer (GH) Regulatory Elements for LINC02729 Gene

Promoters and enhancers for LINC02729 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J017694 Promoter/Enhancer 0.7 Ensembl dbSUPER 633.3 +1.5 1525 0.4 LINC02729 ENSG00000254586
GH11J017718 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE dbSUPER 29.7 -23.1 -23087 4.8 ZNF121 CTCF YY1 GLIS2 ZBTB8A PRDM10 ZIC2 REST PATZ1 ARNT MYOD1 LINC02729 ENSG00000254586 KCNC1
GH11J017696 Enhancer 1.2 Ensembl ENCODE dbSUPER 35.6 -2.8 -2798 8.2 ZFX SIX5 CBFA2T2 ZNF148 TRIM24 EGR1 PKNOX1 PRDM12 ATF1 ZNF143 SAAL1 LINC02729 GTF2H1 ENSG00000256282 SNORD14A SPTY2D1 SNORD14B ENSG00000256361 PIK3C2A ENSG00000254586
GH11J017683 Enhancer 1.1 Ensembl ENCODE dbSUPER 25.8 +13.7 13714 1.6 MAFK SP1 ZNF629 SMARCC1 ZNF316 CEBPB JUN RCOR1 ZNF766 JUND LINC02729 ENSG00000254586 GC11M017461
GH11J017734 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 11.1 -37.7 -37675 1.6 GLIS2 ZBTB8A PRDM10 ZIC2 ZNF143 REST ZEB2 POLR2A PATZ1 ZNF692 KCNC1 LINC02729 ENSG00000254586 SERGEF GC11P017772
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02729 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02729 Gene

Genomic Locations for LINC02729 Gene
2,260 bases
Minus strand

Genomic View for LINC02729 Gene

Genes around LINC02729 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02729 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02729 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02729 Gene

Proteins for LINC02729 Gene

Post-translational modifications for LINC02729 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02729 Gene

Domains & Families for LINC02729 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02729 Gene

Function for LINC02729 Gene

Phenotypes From GWAS Catalog for LINC02729 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02729 Gene

Localization for LINC02729 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02729 Gene

Pathways & Interactions for LINC02729 Gene

PathCards logo

SuperPathways for LINC02729 Gene

No Data Available

Interacting Proteins for LINC02729 Gene

Gene Ontology (GO) - Biological Process for LINC02729 Gene


No data available for Pathways by source and SIGNOR curated interactions for LINC02729 Gene

Drugs & Compounds for LINC02729 Gene

No Compound Related Data Available

Transcripts for LINC02729 Gene

mRNA/cDNA for LINC02729 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02729 Gene

No ASD Table

Relevant External Links for LINC02729 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for LINC02729 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02729 Gene

Orthologs for LINC02729 Gene

Evolution for LINC02729 Gene

Gene Tree for LINC02729 (if available)
Gene Tree for LINC02729 (if available)

No data available for Orthologs for LINC02729 Gene

Paralogs for LINC02729 Gene

No data available for Paralogs for LINC02729 Gene

Variants for LINC02729 Gene

Sequence variations from dbSNP and Humsavar for LINC02729 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1001133928 -- 17,698,861(-) A/G upstream_transcript_variant
rs1001416673 -- 17,698,392(-) G/T upstream_transcript_variant
rs1001936410 -- 17,698,548(-) C/A/T upstream_transcript_variant
rs1002540409 -- 17,697,220(-) C/A/G upstream_transcript_variant
rs1004810860 -- 17,697,277(-) C/T upstream_transcript_variant

Additional Variant Information for LINC02729 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02729 Gene

Disorders for LINC02729 Gene

No disorders were found for LINC02729 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02729 Gene

Publications for LINC02729 Gene

No publications were found for LINC02729 Gene.

No data available for External Links for LINC02729 Gene

Products for LINC02729 Gene

Sources for LINC02729 Gene

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