Aliases for LINC02727 Gene

Subcategory (RNA class) for LINC02727 Gene


Number of RNA Genes sources:

3 / 17

Aliases for LINC02727 Gene

  • Long Intergenic Non-Protein Coding RNA 2727 2 3 5
  • LINC02727 2 5
  • NONHSAG009903.2 91
  • HSALNG0087822 164
  • Lnc-CLMP-2 165

External Ids for LINC02727 Gene

Summaries for LINC02727 Gene

GeneCards Summary for LINC02727 Gene

LINC02727 (Long Intergenic Non-Protein Coding RNA 2727) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02727 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02727 Gene

Genomics for LINC02727 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02727 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J123316 Enhancer 0.4 ENCODE 600.7 -0.9 -898 0 EED RUNX3 FOS LINC02727 PHBP17 lnc-CLMP-4 GRAMD1B CLMP
GH11J123314 Enhancer 0.2 Ensembl 600.7 +0.5 539 0.8 LINC02727 HSALNG0087820 GRAMD1B CLMP
GH11J123315 Enhancer 0.2 Ensembl 600.7 -0.4 -361 0.2 LINC02727 PHBP17 lnc-CLMP-4 GRAMD1B CLMP
GH11J123331 Enhancer 0.5 Ensembl ENCODE 0.4 -15.9 -15861 0.4 FOXA1 ZNF18 PHBP17 lnc-CLMP-4 LINC02727 GRAMD1B CLMP
GH11J123312 Enhancer 0.3 Ensembl 0.7 +2.1 2139 1.2 SP1 LINC02727 HSALNG0087820 GRAMD1B CLMP
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02727 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02727 Gene

Genomic Locations for LINC02727 Gene
1,684 bases
Minus strand
1,097 bases
Minus strand

Genomic View for LINC02727 Gene

Genes around LINC02727 on UCSC Golden Path with GeneCards custom track
LINC02727 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC02727 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02727 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02727 Gene

Proteins for LINC02727 Gene

Post-translational modifications for LINC02727 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02727 Gene

Domains & Families for LINC02727 Gene

Gene Families for LINC02727 Gene

genes like me logo Genes that share domains with LINC02727: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02727 Gene

Function for LINC02727 Gene

Phenotypes From GWAS Catalog for LINC02727 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02727 Gene

Localization for LINC02727 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02727 Gene

Pathways & Interactions for LINC02727 Gene

PathCards logo

SuperPathways for LINC02727 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02727 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02727 Gene

Drugs & Compounds for LINC02727 Gene

No Compound Related Data Available

Transcripts for LINC02727 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02727 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000049B38B_9606 lncRNA 445 4

Ensembl: ENST00000527774 (view in UCSC) ,

LncBook: HSALNT0182606,

LNCipedia: lnc-CLMP-2:4,


URS0000EF20B8_9606 lncRNA 1171 2

HGNC: 54244,

Ensembl: ENST00000657507 (view in UCSC) ,

URS0000063AB7_9606 lncRNA 388 2

Ensembl: ENST00000527533 (view in UCSC) ,

LNCipedia: lnc-CLMP-2:3,

URS0000EEF995_9606 lncRNA 975 1

Ensembl: ENST00000657363 (view in UCSC) ,

URS0000EF60E0_9606 lncRNA 600 1

Ensembl: ENST00000664077 (view in UCSC) ,

LINC02727 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02727 Gene

No ASD Table

Relevant External Links for LINC02727 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for LINC02727 Gene

Expression for LINC02727 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02727 Gene

Orthologs for LINC02727 Gene

Evolution for LINC02727 Gene

Gene Tree for LINC02727 (if available)
Gene Tree for LINC02727 (if available)

No data available for Orthologs for LINC02727 Gene

Paralogs for LINC02727 Gene

No data available for Paralogs for LINC02727 Gene

Variants for LINC02727 Gene

Additional dbSNP identifiers (rs#s) for LINC02727 Gene

Additional Variant Information for LINC02727 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02727 Gene

Disorders for LINC02727 Gene

Additional Disease Information for LINC02727

No disorders were found for LINC02727 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02727 Gene

Publications for LINC02727 Gene

No publications were found for LINC02727 Gene.

No data available for Mastermind for LINC02727 Gene

Products for LINC02727 Gene

Sources for LINC02727 Gene