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Aliases for LINC02725 Gene

Subcategory (RNA class) for LINC02725 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for LINC02725 Gene

  • Long Intergenic Non-Protein Coding RNA 2725 2 3
  • Novel Transcript 5
  • AP000904.1 5

External Ids for LINC02725 Gene

Summaries for LINC02725 Gene

GeneCards Summary for LINC02725 Gene

LINC02725 (Long Intergenic Non-Protein Coding RNA 2725) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC02725 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02725 Gene

Genomics for LINC02725 Gene

GeneHancer (GH) Regulatory Elements for LINC02725 Gene

Promoters and enhancers for LINC02725 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J128172 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +5.1 5120 1.4 CTCF ZNF384 RAD21 REST TRIM22 JUND SMC3 NR2F2 RCOR1 HNF4A C11orf45 LINC02725 LINC02098
GH11J128180 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +13.2 13243 2.5 ZBTB44 SP1 FOS EP300 NR2F2 RCOR1 FOSL2 JUND JUN ETS1-AS1 KCNJ5 LINC02725 LINC02098
GH11J128164 Enhancer 0.5 Ensembl 0.7 -2.2 -2197 2 SP1 PRDM1 SOX13 JUND HNF4A ATF3 SOX5 LINC02725 GC11M128158
GH11J128193 Enhancer 0.8 ENCODE dbSUPER 0.3 +27.5 27514 2.1 CTCF MAFK ZNF316 NFE2 NR2F2 RAD21 POLR2A MYC MAX HLF ETS1-AS1 ETS1 LINC02098 LINC02725
GH11J128173 Enhancer 0.5 Ensembl ENCODE 0.4 +7.6 7619 2 NANOG C11orf45 LINC02725 LINC02098
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02725 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02725 Gene

Genomic Locations for LINC02725 Gene
16,849 bases
Plus strand
3,128 bases
Plus strand

Genomic View for LINC02725 Gene

Genes around LINC02725 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02725 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02725 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02725 Gene

Proteins for LINC02725 Gene

Post-translational modifications for LINC02725 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02725 Gene

Domains & Families for LINC02725 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02725 Gene

Function for LINC02725 Gene

Phenotypes From GWAS Catalog for LINC02725 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02725 Gene

Localization for LINC02725 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02725 Gene

Pathways & Interactions for LINC02725 Gene

PathCards logo

SuperPathways for LINC02725 Gene

No Data Available

Interacting Proteins for LINC02725 Gene

Gene Ontology (GO) - Biological Process for LINC02725 Gene


No data available for Pathways by source and SIGNOR curated interactions for LINC02725 Gene

Drugs & Compounds for LINC02725 Gene

No Compound Related Data Available

Transcripts for LINC02725 Gene

mRNA/cDNA for LINC02725 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02725 Gene

No ASD Table

Relevant External Links for LINC02725 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for LINC02725 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02725 Gene

Orthologs for LINC02725 Gene

Evolution for LINC02725 Gene

Gene Tree for LINC02725 (if available)
Gene Tree for LINC02725 (if available)

No data available for Orthologs for LINC02725 Gene

Paralogs for LINC02725 Gene

No data available for Paralogs for LINC02725 Gene

Variants for LINC02725 Gene

Sequence variations from dbSNP and Humsavar for LINC02725 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000095956 -- 128,162,239(+) T/A intron_variant
rs1000103814 -- 128,120,128(+) G/A intron_variant
rs1000136487 -- 128,120,474(+) T/A intron_variant
rs1000137655 -- 128,183,803(+) T/C/G downstream_transcript_variant
rs1000180287 -- 128,143,907(+) T/C intron_variant

Additional Variant Information for LINC02725 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02725 Gene

Disorders for LINC02725 Gene

No disorders were found for LINC02725 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02725 Gene

Publications for LINC02725 Gene

No publications were found for LINC02725 Gene.

No data available for External Links for LINC02725 Gene

Products for LINC02725 Gene

Sources for LINC02725 Gene

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