Aliases for LINC02705 Gene

Data sources for LINC02705 Gene:

Subcategory (RNA class) for LINC02705 Gene

lncRNA

Aliases for LINC02705 Gene

External Ids for LINC02705 Gene

Previous GeneCards Identifiers for LINC02705 Gene

  • GC11M060161
  • GC11M060336
  • GC11M061291

Summaries for LINC02705 Gene

GeneCards Summary for LINC02705 Gene

LINC02705 (Long Intergenic Non-Protein Coding RNA 2705) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02705 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02705 Gene

Genomics for LINC02705 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02705 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J060168 Enhancer 0.9 ENCODE dbSUPER 250.7 -1.2 -1229 1.4 CTCF BRCA1 ZBTB7B CEBPB ELK1 REST FOXA2 MAX EP300 PRDM1 LINC02705 LINC02739 MS4A6E MS4A6A lnc-MS4A6A-1 MS4A2
GH11J060165 Enhancer 0.6 Ensembl ENCODE 250.7 +1.8 1846 2.4 FOSL1 BATF JUNB RUNX3 LINC02705 MS4A6E MS4A6A piR-45605-003 MS4A2
GH11J060180 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE dbSUPER 0.4 -15.2 -15215 6.5 NR2C1 IKZF1 TRIM22 TAL1 SPI1 SMARCA4 HDAC2 FOXM1 TCF12 NCOA1 MS4A6A MS4A4A lnc-MS4A6A-1 MS4A2 MS4A6E LINC02705
GH11J060159 Enhancer 0.5 Ensembl 0.4 +7.7 7747 3.8 CEBPB EP300 FOSL1 FOXA1 FOS MS4A2 TCN1 MS4A6A LINC02705 piR-45605-003
GH11J060174 Enhancer 0.3 FANTOM5 dbSUPER 0.4 -5.7 -5745 0.1 TCN1 MS4A6A MS4A4A MS4A7 LINC02705 lnc-MS4A6A-1 MS4A2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02705 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02705 Gene

Latest Assembly
chr11:60,159,241-60,168,447
(GRCh38/hg38)
Size:
9,207 bases
Orientation:
Minus strand

Previous Assembly
chr11:59,927,160-59,928,295
(GRCh37/hg19 by Ensembl)
Size:
1,136 bases
Orientation:
Minus strand

Genomic View for LINC02705 Gene

Genes around LINC02705 on UCSC Golden Path with GeneCards custom track
LINC02705 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC02705 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02705 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02705 Gene

Proteins for LINC02705 Gene

Post-translational modifications for LINC02705 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02705 Gene

Domains & Families for LINC02705 Gene

Gene Families for LINC02705 Gene

genes like me logo Genes that share domains with LINC02705: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02705 Gene

Function for LINC02705 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02705 Gene

Localization for LINC02705 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02705 Gene

Pathways & Interactions for LINC02705 Gene

PathCards logo

SuperPathways for LINC02705 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02705 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02705 Gene

Drugs & Compounds for LINC02705 Gene

No Compound Related Data Available

Transcripts for LINC02705 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02705 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000487824_9606 lncRNA 388 4

Ensembl: ENST00000533106 (view in UCSC) ,

LncBook: HSALNT0175642,

LNCipedia: lnc-MS4A6A-2:1,

NONCODE: NONHSAT021559.2,

URS00009B89BB_9606 lncRNA 416 2

LncBook: HSALNT0175643,

NONCODE: NONHSAT160354.1,

URS0001BF92C7_9606 lncRNA 416 1

LncBook: HSALNT0175643,

LINC02705 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02705 Gene

No ASD Table

Relevant External Links for LINC02705 Gene

GeneLoc Exon Structure for
LINC02705

No data available for mRNA/cDNA for LINC02705 Gene

Expression for LINC02705 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02705 Gene

Orthologs for LINC02705 Gene

Evolution for LINC02705 Gene

ENSEMBL:
Gene Tree for LINC02705 (if available)
TreeFam:
Gene Tree for LINC02705 (if available)

No data available for Orthologs for LINC02705 Gene

Paralogs for LINC02705 Gene

No data available for Paralogs for LINC02705 Gene

Variants for LINC02705 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC02705 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LINC02705 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02705

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02705 Gene

Disorders for LINC02705 Gene

Additional Disease Information for LINC02705

Open Targets Platform
Open Targets Platform

No disorders were found for LINC02705 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02705 Gene

Publications for LINC02705 Gene

No publications were found for LINC02705 Gene.

No data available for Mastermind for LINC02705 Gene

Products for LINC02705 Gene

Sources for LINC02705 Gene