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Aliases for LINC02705 Gene

Subcategory (RNA class) for LINC02705 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for LINC02705 Gene

  • Long Intergenic Non-Protein Coding RNA 2705 2 3
  • Novel Transcript 5
  • AP001257.1 5

External Ids for LINC02705 Gene

Summaries for LINC02705 Gene

GeneCards Summary for LINC02705 Gene

LINC02705 (Long Intergenic Non-Protein Coding RNA 2705) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC02705 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02705 Gene

Genomics for LINC02705 Gene

GeneHancer (GH) Regulatory Elements for LINC02705 Gene

Promoters and enhancers for LINC02705 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J060180 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 0.4 -19.5 -19462 6.1 CC2D1A CBFA2T2 TRIM24 SMARCA4 IKZF1 DPF2 IKZF2 TRIM22 HDAC1 ZNF24 MS4A6A MS4A4A MS4A2 MS4A6E LINC02705
GH11J060168 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -6.5 -6495 3.8 CTCF TRIM24 ZNF547 ARID2 ZNF143 REST GABPA SMARCC2 BRCA1 CEBPB LINC02739 OOSP2 MS4A6E CBLIF TCN1 MS4A6A LINC02705
GH11J060165 Enhancer 0.7 Ensembl ENCODE 0.7 -2.5 -2501 3 RUNX3 FOSL1 JUNB BATF JUN FOS MS4A6E MS4A6A LINC02705
GH11J060127 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.3 +36.7 36699 1.4 CC2D1A BACH1 TRIM24 ZNF639 CREB1 DPF2 ATF1 ZNF316 EP300 SOX6 MS4A2 MS4A13 OR10V1 STX3 LINC02705
GH11J060130 Enhancer 1 Ensembl ENCODE 0.3 +33.9 33900 0.6 ZFX CC2D1A CTCF CBFA2T2 ZNF644 RAD21 ARID2 GATAD2A REST PKNOX1 MS4A2 TCN1 LINC02705
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02705 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02705 Gene

Genomic Locations for LINC02705 Gene
chr11:60,159,241-60,164,400
(GRCh38/hg38)
Size:
5,160 bases
Orientation:
Minus strand
chr11:59,927,160-59,928,295
(GRCh37/hg19)
Size:
1,136 bases
Orientation:
Minus strand

Genomic View for LINC02705 Gene

Genes around LINC02705 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02705 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02705 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02705 Gene

Proteins for LINC02705 Gene

Post-translational modifications for LINC02705 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02705 Gene

Domains & Families for LINC02705 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02705 Gene

Function for LINC02705 Gene

Phenotypes From GWAS Catalog for LINC02705 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02705 Gene

Localization for LINC02705 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02705 Gene

Pathways & Interactions for LINC02705 Gene

PathCards logo

SuperPathways for LINC02705 Gene

No Data Available

Interacting Proteins for LINC02705 Gene

Gene Ontology (GO) - Biological Process for LINC02705 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02705 Gene

Drugs & Compounds for LINC02705 Gene

No Compound Related Data Available

Transcripts for LINC02705 Gene

mRNA/cDNA for LINC02705 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02705 Gene

No ASD Table

Relevant External Links for LINC02705 Gene

GeneLoc Exon Structure for
LINC02705
ECgene alternative splicing isoforms for
LINC02705

Expression for LINC02705 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02705 Gene

Orthologs for LINC02705 Gene

Evolution for LINC02705 Gene

ENSEMBL:
Gene Tree for LINC02705 (if available)
TreeFam:
Gene Tree for LINC02705 (if available)

No data available for Orthologs for LINC02705 Gene

Paralogs for LINC02705 Gene

No data available for Paralogs for LINC02705 Gene

Variants for LINC02705 Gene

Sequence variations from dbSNP and Humsavar for LINC02705 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000359002 -- 60,165,794(-) G/C upstream_transcript_variant
rs1000390055 -- 60,165,531(-) T/C upstream_transcript_variant
rs1000587192 -- 60,159,799(-) A/G non_coding_transcript_variant
rs1000807875 -- 60,161,416(-) C/T non_coding_transcript_variant
rs1001155275 -- 60,161,150(-) C/A intron_variant, non_coding_transcript_variant

Additional Variant Information for LINC02705 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02705

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02705 Gene

Disorders for LINC02705 Gene

No disorders were found for LINC02705 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02705 Gene

Publications for LINC02705 Gene

No publications were found for LINC02705 Gene.

No data available for External Links for LINC02705 Gene

Products for LINC02705 Gene

Sources for LINC02705 Gene

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