Aliases for LINC02704 Gene

Subcategory (RNA class) for LINC02704 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC02704 Gene

  • Long Intergenic Non-Protein Coding RNA 2704 2 3 5
  • LINC02704 2 5
  • NONHSAG008149.2 91
  • HSALNG0083894 164
  • Lnc-TP53I11-4 165

External Ids for LINC02704 Gene

Summaries for LINC02704 Gene

GeneCards Summary for LINC02704 Gene

LINC02704 (Long Intergenic Non-Protein Coding RNA 2704) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02704 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02704 Gene

Genomics for LINC02704 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02704 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J044700 Enhancer 0.9 FANTOM5 Ensembl ENCODE 600.7 +0.5 459 3 KDM1A TSC22D4 ZFHX2 ZNF189 ZNF16 VEZF1 KLF1 ZMYM3 EGR2 LINC02704 MN309239 ALKBH3 SEC14L1P1 EXT2 TSPAN18 CD82 HSALNG0083894
GH11J044702 Enhancer 0.6 Ensembl ENCODE 600.7 -1.6 -1552 0.6 JUND ZFHX2 VEZF1 ZNF398 EGR2 LINC02704 MN309239 TSPAN18 CD82
GH11J044696 Enhancer 0.6 Ensembl 0.4 +6.1 6058 0.2 MGA USF1 NFYB ZFHX2 TOE1 RAD51 USF2 L3MBTL2 CBFA2T2 SREBF1 HSALNG0083894 TSPAN18 LINC02704 HSALNG0083892 CD82
GH11J044695 Enhancer 0.3 Ensembl 0.4 +6.9 6858 0.2 RCOR1 HSALNG0083894 TSPAN18 LINC02704 HSALNG0083892 CD82
GH11J044693 Enhancer 0.2 Ensembl 0.4 +8.3 8258 0.2 TSPAN18 CD82 HSALNG0083894 LINC02704 HSALNG0083892
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02704 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02704 Gene

Genomic Locations for LINC02704 Gene
chr11:44,689,359-44,701,359
(GRCh38/hg38)
Size:
12,001 bases
Orientation:
Minus strand
chr11:44,716,413-44,717,851
(GRCh37/hg19)
Size:
1,439 bases
Orientation:
Minus strand

Genomic View for LINC02704 Gene

Genes around LINC02704 on UCSC Golden Path with GeneCards custom track
LINC02704 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC02704 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02704 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02704 Gene

Proteins for LINC02704 Gene

Post-translational modifications for LINC02704 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02704 Gene

Domains & Families for LINC02704 Gene

Gene Families for LINC02704 Gene

genes like me logo Genes that share domains with LINC02704: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02704 Gene

Function for LINC02704 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02704 Gene

Localization for LINC02704 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02704 Gene

Pathways & Interactions for LINC02704 Gene

PathCards logo

SuperPathways for LINC02704 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02704 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02704 Gene

Drugs & Compounds for LINC02704 Gene

No Compound Related Data Available

Transcripts for LINC02704 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02704 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000057F5D2_9606 lncRNA 789 5

HGNC: 54220,

Ensembl: ENST00000532748 (view in UCSC) ,

LncBook: HSALNT0174685,

LNCipedia: lnc-TP53I11-4:1,

NONCODE: NONHSAT018989.2,

URS00009C2E6C_9606 lncRNA 789 2

LncBook: HSALNT0174686,

NONCODE: NONHSAT160292.1,

LINC02704 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02704 Gene

No ASD Table

Relevant External Links for LINC02704 Gene

GeneLoc Exon Structure for
LINC02704

No data available for mRNA/cDNA for LINC02704 Gene

Expression for LINC02704 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02704 Gene

Orthologs for LINC02704 Gene

Evolution for LINC02704 Gene

ENSEMBL:
Gene Tree for LINC02704 (if available)
TreeFam:
Gene Tree for LINC02704 (if available)

No data available for Orthologs for LINC02704 Gene

Paralogs for LINC02704 Gene

No data available for Paralogs for LINC02704 Gene

Variants for LINC02704 Gene

Additional dbSNP identifiers (rs#s) for LINC02704 Gene

Additional Variant Information for LINC02704 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02704

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02704 Gene

Disorders for LINC02704 Gene

No disorders were found for LINC02704 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02704 Gene

Publications for LINC02704 Gene

No publications were found for LINC02704 Gene.

No data available for Mastermind for LINC02704 Gene

Products for LINC02704 Gene

Sources for LINC02704 Gene