LINC02703 Gene (RNA Gene)

Long Intergenic Non-Protein Coding RNA 2703

GC11P115920
GIFtS:
6
See more...

Aliases for LINC02703 Gene

Subcategory (RNA class) for LINC02703 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC02703 Gene

  • Long Intergenic Non-Protein Coding RNA 2703 2 3 5
  • LINC02703 2 5
  • NONHSAG009690.2 91
  • HSALNG0087360 164
  • Lnc-APOC3-6 165

External Ids for LINC02703 Gene

Previous GeneCards Identifiers for LINC02703 Gene

  • GC11P115661

Summaries for LINC02703 Gene

GeneCards Summary for LINC02703 Gene

LINC02703 (Long Intergenic Non-Protein Coding RNA 2703) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02703 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02703 Gene

Genomics for LINC02703 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for LINC02703 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH11J115918 Enhancer 1.2 FANTOM5 Ensembl ENCODE 619.1 +0.4 395 3.1 SP1 PRDM10 BACH1 JUND FOXA1 STAT3 ZNF143 RELA ZIC2 SMAD5 LINC02703 BUD13 lnc-CADM1-10 ENSG00000244259 CADM1 lnc-CADM1-4
GH11J115924 Enhancer 1.2 FANTOM5 Ensembl ENCODE 12.2 +6.1 6127 3.8 SP1 POLR2A BACH1 STAT3 JUND ZNF143 RELA SMAD5 TCF12 IKZF2 LINC02703 ENSG00000244259 lnc-CADM1-10 CADM1 lnc-CADM1-4 BUD13
GH11J115930 Promoter/Enhancer 1.1 Ensembl ENCODE 10.9 +11.7 11721 1.3 ZIC2 IKZF2 ARID3A ELK1 DPF2 RELB RUNX3 GATAD2B BCLAF1 BCL11A LINC02703 lnc-CADM1-10 ENSG00000244259 CADM1 lnc-CADM1-4 BUD13
GH11J115941 Enhancer 1 Ensembl ENCODE 11.9 +21.5 21510 4.2 CREB1 JUND TCF12 IKZF2 PKNOX1 ZSCAN29 DPF2 CEBPB RUNX3 GATAD2B LINC02703 ENSG00000244259 lnc-CADM1-10 CADM1 lnc-CADM1-4 BUD13
GH11J115912 Enhancer 0.8 Ensembl ENCODE 12.3 -6.9 -6873 1.8 CTCF TEAD4 RFX5 RAD21 TRIM22 IRF3 BCLAF1 SMC3 RCOR1 EBF1 LINC02703 lnc-CADM1-3 LINC02698 CADM1 lnc-CADM1-4 BUD13
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02703 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02703 Gene

Genomic Locations for LINC02703 Gene
chr11:115,919,574-115,947,236
(GRCh38/hg38)
Size:
27,663 bases
Orientation:
Plus strand

Genomic View for LINC02703 Gene

Genes around LINC02703 on UCSC Golden Path with GeneCards custom track
LINC02703 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC02703 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02703 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LINC02703 Gene

Proteins for LINC02703 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LINC02703 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02703 Gene

Domains & Families for LINC02703 Gene

Gene Families for LINC02703 Gene

HGNC:
genes like me logo Genes that share domains with LINC02703: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02703 Gene

Function for LINC02703 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for LINC02703 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02703 Gene

Localization for LINC02703 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02703 Gene

Pathways & Interactions for LINC02703 Gene

PathCards logo

SuperPathways for LINC02703 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02703 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02703 Gene

Drugs & Compounds for LINC02703 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LINC02703 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02703 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00004B69F4_9606 lncRNA 548 4

Ensembl: ENST00000537491 (view in UCSC) ,

LncBook: HSALNT0181578,

LNCipedia: lnc-APOC3-6:7,

NONCODE: NONHSAT024327.2,

URS00003B608C_9606 lncRNA 303 4

Ensembl: ENST00000539222 (view in UCSC) ,

LncBook: HSALNT0181581,

LNCipedia: lnc-APOC3-6:8,

NONCODE: NONHSAT024328.2,

URS0000EF1490_9606 lncRNA 1269 2

HGNC: 54218,

Ensembl: ENST00000653503 (view in UCSC) ,

URS00008BB9F6_9606 lncRNA 716 3

LncBook: HSALNT0181588,

LNCipedia: lnc-APOC3-6:4,

NONCODE: NONHSAT024329.2,

URS00008BFF1B_9606 lncRNA 699 3

LncBook: HSALNT0181589,

LNCipedia: lnc-APOC3-6:5,

NONCODE: NONHSAT024330.2,

LINC02703 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02703 Gene

No ASD Table

Relevant External Links for LINC02703 Gene

GeneLoc Exon Structure for
LINC02703

No data available for mRNA/cDNA for LINC02703 Gene

Expression for LINC02703 Gene

Products:

  1. Primer

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC02703

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02703 Gene

Orthologs for LINC02703 Gene

Evolution for LINC02703 Gene

ENSEMBL:
Gene Tree for LINC02703 (if available)
TreeFam:
Gene Tree for LINC02703 (if available)

No data available for Orthologs for LINC02703 Gene

Paralogs for LINC02703 Gene

No data available for Paralogs for LINC02703 Gene

Variants for LINC02703 Gene

Additional dbSNP identifiers (rs#s) for LINC02703 Gene

Additional Variant Information for LINC02703 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02703

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02703 Gene

Disorders for LINC02703 Gene

Additional Disease Information for LINC02703

Open Targets Platform

No disorders were found for LINC02703 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02703 Gene

Publications for LINC02703 Gene

No publications were found for LINC02703 Gene.

No data available for Mastermind for LINC02703 Gene

Products for LINC02703 Gene

Sources for LINC02703 Gene