Aliases for LINC02697 Gene

Data sources for LINC02697 Gene:

Subcategory (RNA class) for LINC02697 Gene

lncRNA

Aliases for LINC02697 Gene

External Ids for LINC02697 Gene

Summaries for LINC02697 Gene

GeneCards Summary for LINC02697 Gene

LINC02697 (Long Intergenic Non-Protein Coding RNA 2697) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02697 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02697 Gene

Genomics for LINC02697 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC02697 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J134948 Enhancer 0.9 Ensembl ENCODE dbSUPER 256.7 +1.3 1345 4.8 ZIC2 CEBPB EP300 JUND GLIS1 ZNF366 ZBTB17 ZBTB20 ZNF600 LINC02697 HSALNG0088422 LINC02684 HSALNG0088423 ENSG00000287251 B3GAT1
GH11J134989 Enhancer 0.7 Ensembl ENCODE dbSUPER 5.8 +44.3 44296 6.9 YY1 NANOG POLR2A LINC02684 LINC02697 piR-49097-024 HSALNG0088426 LOC105369587 LINC02717 B3GAT1
GH11J134941 Enhancer 0.7 Ensembl dbSUPER 6 -7.2 -7155 4.2 CTCF ZIC2 GABPB1 SCRT1 ELF3 RAD21 ELF1 LINC02684 LINC02697 HSALNG0088422 ENSG00000287251 piR-30176-001 B3GAT1
GH11J135008 Enhancer 0.5 Ensembl ENCODE 5.6 +58.6 58645 2.2 RCOR1 GATA2 LINC02717 piR-38736-004 LINC02684 LINC02697 LOC105369587 HSALNG0088426 B3GAT1
GH11J134988 Enhancer 0.4 Ensembl dbSUPER 5.6 +39.9 39945 0.8 MNT piR-49097-024 LINC02684 LINC02697 ENSG00000279046 HSALNG0088426 B3GAT1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02697 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02697 Gene

Latest Assembly
chr11:134,948,656-134,964,501
(GRCh38/hg38)
Size:
15,846 bases
Orientation:
Plus strand

Previous Assembly
chr11:134,820,602-134,821,462
(GRCh37/hg19 by Ensembl)
Size:
861 bases
Orientation:
Plus strand

Genomic View for LINC02697 Gene

Genes around LINC02697 on UCSC Golden Path with GeneCards custom track
LINC02697 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC02697 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02697 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02697 Gene

Proteins for LINC02697 Gene

Post-translational modifications for LINC02697 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02697 Gene

Domains & Families for LINC02697 Gene

Gene Families for LINC02697 Gene

genes like me logo Genes that share domains with LINC02697: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02697 Gene

Function for LINC02697 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02697 Gene

Localization for LINC02697 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02697 Gene

Pathways & Interactions for LINC02697 Gene

PathCards logo

SuperPathways for LINC02697 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02697 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02697 Gene

Drugs & Compounds for LINC02697 Gene

No Compound Related Data Available

Transcripts for LINC02697 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02697 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000537683_9606 lncRNA 762 4

Ensembl: ENST00000528497 (view in UCSC) ,

LncBook: HSALNT0183917,

LNCipedia: lnc-GLB1L2-5:1,

NONCODE: NONHSAT025286.2,

URS00009B789B_9606 lncRNA 762 2

LncBook: HSALNT0183918,

NONCODE: NONHSAT159968.1,

URS0001BD1493_9606 lncRNA 10579 1

LncBook: HSALNT0183915,

URS0000E950CA_9606 lncRNA 10578 1

LncBook: HSALNT0183915,

URS0001BE3F46_9606 lncRNA 8524 1

LncBook: HSALNT0183914,

LINC02697 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02697 Gene

No ASD Table

Relevant External Links for LINC02697 Gene

GeneLoc Exon Structure for
LINC02697

No data available for mRNA/cDNA for LINC02697 Gene

Expression for LINC02697 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02697 Gene

Orthologs for LINC02697 Gene

Evolution for LINC02697 Gene

ENSEMBL:
Gene Tree for LINC02697 (if available)
TreeFam:
Gene Tree for LINC02697 (if available)

No data available for Orthologs for LINC02697 Gene

Paralogs for LINC02697 Gene

No data available for Paralogs for LINC02697 Gene

Variants for LINC02697 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC02697 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LINC02697 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02697

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02697 Gene

Disorders for LINC02697 Gene

No disorders were found for LINC02697 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02697 Gene

Publications for LINC02697 Gene

No publications were found for LINC02697 Gene.

No data available for Mastermind for LINC02697 Gene

Products for LINC02697 Gene

Sources for LINC02697 Gene