LINC02696 Gene (RNA Gene)

Long Intergenic Non-Protein Coding RNA 2696

GC11P045358
GIFtS:
8
See more...

Aliases for LINC02696 Gene

Subcategory (RNA class) for LINC02696 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC02696 Gene

  • Long Intergenic Non-Protein Coding RNA 2696 2 3 5
  • LINC02696 2 5
  • NONHSAG008164.2 91
  • HSALNG0083922 164
  • Lnc-PRDM11-3 165

External Ids for LINC02696 Gene

Summaries for LINC02696 Gene

GeneCards Summary for LINC02696 Gene

LINC02696 (Long Intergenic Non-Protein Coding RNA 2696) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC02696 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC02696 Gene

Genomics for LINC02696 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for LINC02696 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC02696 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC02696 Gene

Genomic Locations for LINC02696 Gene
chr11:45,355,282-45,367,490
(GRCh38/hg38)
Size:
12,209 bases
Orientation:
Plus strand
chr11:45,376,922-45,387,672
(GRCh37/hg19)
Size:
10,751 bases
Orientation:
Plus strand

Genomic View for LINC02696 Gene

Genes around LINC02696 on UCSC Golden Path with GeneCards custom track
LINC02696 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC02696 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02696 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LINC02696 Gene

Proteins for LINC02696 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LINC02696 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02696 Gene

Domains & Families for LINC02696 Gene

Gene Families for LINC02696 Gene

HGNC:
genes like me logo Genes that share domains with LINC02696: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC02696 Gene

Function for LINC02696 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for LINC02696 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02696 Gene

Localization for LINC02696 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02696 Gene

Pathways & Interactions for LINC02696 Gene

PathCards logo

SuperPathways for LINC02696 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC02696 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC02696 Gene

Drugs & Compounds for LINC02696 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LINC02696 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC02696 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075EAF9_9606 lncRNA 1011 4

HGNC: 54210,

RefSeq: NR_120557,

LncBook: HSALNT0174760,

LNCipedia: lnc-PRDM11-3:9,

URS000052E856_9606 lncRNA 605 4

Ensembl: ENST00000524410 (view in UCSC) ,

LncBook: HSALNT0174761,

LNCipedia: lnc-PRDM11-3:1,

NONCODE: NONHSAT019019.2,

URS00005046E5_9606 lncRNA 872 3

Ensembl: ENST00000524565 (view in UCSC) ,

LNCipedia: lnc-PRDM11-3:4,

NONCODE: NONHSAT019021.2,

URS0000529A72_9606 lncRNA 361 3

Ensembl: ENST00000524488 (view in UCSC) ,

LNCipedia: lnc-PRDM11-3:3,

NONCODE: NONHSAT019020.2,

URS0000EF1C06_9606 lncRNA 3326 1

Ensembl: ENST00000670220 (view in UCSC) ,

LINC02696 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC02696 Gene

4 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02696 Gene

No ASD Table

Relevant External Links for LINC02696 Gene

GeneLoc Exon Structure for
LINC02696

Expression for LINC02696 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02696 Gene

Orthologs for LINC02696 Gene

Evolution for LINC02696 Gene

ENSEMBL:
Gene Tree for LINC02696 (if available)
TreeFam:
Gene Tree for LINC02696 (if available)

No data available for Orthologs for LINC02696 Gene

Paralogs for LINC02696 Gene

No data available for Paralogs for LINC02696 Gene

Variants for LINC02696 Gene

Additional dbSNP identifiers (rs#s) for LINC02696 Gene

Additional Variant Information for LINC02696 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02696

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02696 Gene

Disorders for LINC02696 Gene

No disorders were found for LINC02696 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02696 Gene

Publications for LINC02696 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3

No data available for Mastermind for LINC02696 Gene

Products for LINC02696 Gene

Sources for LINC02696 Gene